Gene Pisl_1171 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPisl_1171 
Symbol 
ID4616402 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum islandicum DSM 4184 
KingdomArchaea 
Replicon accessionNC_008701 
Strand
Start bp1062735 
End bp1063544 
Gene Length810 bp 
Protein Length269 aa 
Translation table11 
GC content44% 
IMG OID639784264 
Producthypothetical protein 
Protein accessionYP_930682 
Protein GI119872675 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0614] ABC-type Fe3+-hydroxamate transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.51603 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones52 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATTTTTA GAGGGGCGTT AGACGGCGTG CCAGAGAAAG TGGTTAGTTT AAACCCCTCT 
GTAAACGAGT TTCTGGCTAT ACTTAACATA AGTTTGGCAG GCCGCGACGC TTTTTCATAT
AGACCTGCGG AATTACTCAG AGTGCCGATT GTCGGAACCT TCGTAGACGT TAATATGGAT
GTGCTAGAGA AAATTCGGCC AGATCTCGTA ATTTTATACT ACCCAGTCCA AAAACATTTA
TTAGACGAAG TAACGAAAAT TGCCAAGGCA GTTATAGCAG TTCCAACGCC GACAAATATA
GACCATGTCG TGGCCATCTT TAGATTTTTT GCAAGAATAT TTGATAAAGA CGAGGAAGGG
GATAGAGTCG CAGGTATATA CCGAGAGTTG TTTAAAGGCG TACCGCTATA TGACGACGTC
TTGGCAATTA TAAACCTAGG CGTTTACGAC GTGGCTTGTA GCAACTCCTA TGTCGCAGAC
GCGTTGACAC ATATAGGCTT GAGATATATG AGGGGCCTCC CTTGTGTGTT TAGACAAAAC
GAAAGCCCCC CAACCGAGTT GATAGAAAGA GCAAAATTTG TAGTTTATGA AGCCAAGGGG
AAGATGTATT ACGAAAAAGA GGTTCAGTTT CTTAGAGAGA AGCCGTATGT CGTAACTCCC
AACGACACGT TAGCCCACTA CGGGCCTTCG CTTCCGTTAG ATCTCCAACT GCTTTTAAAC
GCAGTTGCAA AAGACATGAG ATTTGTAGAT AAAACCTCCA GCGTCTCTAG GCCGAGCCTA
AGAGACAGGT GGTATTCTCC ATATAGATGA
 
Protein sequence
MIFRGALDGV PEKVVSLNPS VNEFLAILNI SLAGRDAFSY RPAELLRVPI VGTFVDVNMD 
VLEKIRPDLV ILYYPVQKHL LDEVTKIAKA VIAVPTPTNI DHVVAIFRFF ARIFDKDEEG
DRVAGIYREL FKGVPLYDDV LAIINLGVYD VACSNSYVAD ALTHIGLRYM RGLPCVFRQN
ESPPTELIER AKFVVYEAKG KMYYEKEVQF LREKPYVVTP NDTLAHYGPS LPLDLQLLLN
AVAKDMRFVD KTSSVSRPSL RDRWYSPYR