Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pisl_1171 |
Symbol | |
ID | 4616402 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pyrobaculum islandicum DSM 4184 |
Kingdom | Archaea |
Replicon accession | NC_008701 |
Strand | - |
Start bp | 1062735 |
End bp | 1063544 |
Gene Length | 810 bp |
Protein Length | 269 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 639784264 |
Product | hypothetical protein |
Protein accession | YP_930682 |
Protein GI | 119872675 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0614] ABC-type Fe3+-hydroxamate transport system, periplasmic component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.51603 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 52 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGATTTTTA GAGGGGCGTT AGACGGCGTG CCAGAGAAAG TGGTTAGTTT AAACCCCTCT GTAAACGAGT TTCTGGCTAT ACTTAACATA AGTTTGGCAG GCCGCGACGC TTTTTCATAT AGACCTGCGG AATTACTCAG AGTGCCGATT GTCGGAACCT TCGTAGACGT TAATATGGAT GTGCTAGAGA AAATTCGGCC AGATCTCGTA ATTTTATACT ACCCAGTCCA AAAACATTTA TTAGACGAAG TAACGAAAAT TGCCAAGGCA GTTATAGCAG TTCCAACGCC GACAAATATA GACCATGTCG TGGCCATCTT TAGATTTTTT GCAAGAATAT TTGATAAAGA CGAGGAAGGG GATAGAGTCG CAGGTATATA CCGAGAGTTG TTTAAAGGCG TACCGCTATA TGACGACGTC TTGGCAATTA TAAACCTAGG CGTTTACGAC GTGGCTTGTA GCAACTCCTA TGTCGCAGAC GCGTTGACAC ATATAGGCTT GAGATATATG AGGGGCCTCC CTTGTGTGTT TAGACAAAAC GAAAGCCCCC CAACCGAGTT GATAGAAAGA GCAAAATTTG TAGTTTATGA AGCCAAGGGG AAGATGTATT ACGAAAAAGA GGTTCAGTTT CTTAGAGAGA AGCCGTATGT CGTAACTCCC AACGACACGT TAGCCCACTA CGGGCCTTCG CTTCCGTTAG ATCTCCAACT GCTTTTAAAC GCAGTTGCAA AAGACATGAG ATTTGTAGAT AAAACCTCCA GCGTCTCTAG GCCGAGCCTA AGAGACAGGT GGTATTCTCC ATATAGATGA
|
Protein sequence | MIFRGALDGV PEKVVSLNPS VNEFLAILNI SLAGRDAFSY RPAELLRVPI VGTFVDVNMD VLEKIRPDLV ILYYPVQKHL LDEVTKIAKA VIAVPTPTNI DHVVAIFRFF ARIFDKDEEG DRVAGIYREL FKGVPLYDDV LAIINLGVYD VACSNSYVAD ALTHIGLRYM RGLPCVFRQN ESPPTELIER AKFVVYEAKG KMYYEKEVQF LREKPYVVTP NDTLAHYGPS LPLDLQLLLN AVAKDMRFVD KTSSVSRPSL RDRWYSPYR
|
| |