Gene Pisl_1149 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPisl_1149 
Symbol 
ID4616508 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum islandicum DSM 4184 
KingdomArchaea 
Replicon accessionNC_008701 
Strand
Start bp1038335 
End bp1039159 
Gene Length825 bp 
Protein Length274 aa 
Translation table11 
GC content47% 
IMG OID639784245 
Producthypothetical protein 
Protein accessionYP_930663 
Protein GI119872656 
COG category[B] Chromatin structure and dynamics
[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0123] Deacetylases, including yeast histone deacetylase and acetoin utilization protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value5.29895e-17 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGGAAATAG TAAGTATATA TGTGTTACTA GTACACACAA GTTTTTCAGA CTGGGTGTCT 
AAAGCCTTGA GAGAAGCCGG GGCAGAGGTT GTAGAAGGCC TAGGCTCTTG GGACGCCGTG
CGTTTTATAC ATAGTGAAAA TTTTGTAAAG GCAGTTGCAA AACGCGAGTT GGAGACCTTA
GCCGCAGTCG CAGTCGCCGA AGTTGCGTTA ACGAAAAGAC AGGCCATATT TTATGCCGGC
GGCACGGCGA TGGCGGGATT ACATACGCCG AGGAGAAACA ATGTATTTAA CGCCGCTGTA
TATATAGCAA AGAAACTCAA CGCCGCGGTT ATATCAATAG ATAGACATTT CCCAGTTGGG
ACTTGGGAGC TCCATCTAGA GTATAAATTT CCGCTTTATT TAGTCTATGG CGGCGCCGAC
GGGCCATCCT ACGGCTATGT AAAGAGGCGT GGATATAATG TAGTTGTCTT TCCACTACCT
CCGGGAGTTG GAGATCGTGG TTTTGAAAAA GTGGTTAGTT TTATCCTAAG AGCGGCCGAA
GGCCCCCTCG TTTTACAACT CGGCTTTGAT ATACATAGAG ACGATCCGAC AGGCTATTTC
TTCGCCTCAG AATATTTCTA CTACGCCTTG GGGAGGGCGC TTGCCACACG CGACTTCTAC
ATATCTATCG AATGCCCCTC TACCCAGAGG GTGTTTGTCT CAGCCTTGGC GAGTCTTTTA
AACGGCATTA GAGGCGCAGA GCCTCCCAAA ATAGAGATCT ATAGAGAAAG TACAGAGGTT
ATGAAAGAAG TAGCTATGTT AATCAAGCGA GCTAAGAGAG TTTAA
 
Protein sequence
MEIVSIYVLL VHTSFSDWVS KALREAGAEV VEGLGSWDAV RFIHSENFVK AVAKRELETL 
AAVAVAEVAL TKRQAIFYAG GTAMAGLHTP RRNNVFNAAV YIAKKLNAAV ISIDRHFPVG
TWELHLEYKF PLYLVYGGAD GPSYGYVKRR GYNVVVFPLP PGVGDRGFEK VVSFILRAAE
GPLVLQLGFD IHRDDPTGYF FASEYFYYAL GRALATRDFY ISIECPSTQR VFVSALASLL
NGIRGAEPPK IEIYRESTEV MKEVAMLIKR AKRV