Gene Pisl_1120 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPisl_1120 
Symbol 
ID4616390 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum islandicum DSM 4184 
KingdomArchaea 
Replicon accessionNC_008701 
Strand
Start bp1017868 
End bp1018593 
Gene Length726 bp 
Protein Length241 aa 
Translation table11 
GC content45% 
IMG OID639784214 
Producthypothetical protein 
Protein accessionYP_930634 
Protein GI119872627 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value0.00997695 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGTGTAT GCCCAGCTCT TAGGCGGGTA GAAAGCGGAT TTATATGTAG CTACAGTAAT 
AAGCCGATAG ACCCGTTTAG TTGGTATTGT ATAGGCAACT ATACGGAATG TCCTATCTTT
ATCAGATTTT CGCGAGAGGA GAAGAAGCCA GCGGCGCCCA AGCCTGAGGA GGCGCCGAAG
CCTCTTACAG AGGTTATTCC TCTTGCGCCA GAGAAGGCAG AGACTGAGTT TGAAAAGGCG
ATTAAGCCCG CTGTCGATAA TGTTGTTTTA AAATACGACG ACTTAGTGAA AAAACTTGAC
GATATGTGGA AGGAGTATGA AAGCAGCGTG ATTGGGGCGA GAAAACAGTG GGAGGTAGAA
AAGATGACGC TTGTGAGGGC GCAAGAGATT CTAAATAAAA CAATCGGCGA CTATGAAAAG
ATGCTGGCCG AGGTGGAGCT AAAGAAGGAC TTTATGCCAC AAGACGCCTA TGAAAACATC
AAGAGAGAGC TTGAGACAAA ACTAGAGAGT CTAAAGGGGC TTTTAGACGA GGTTAGATCT
AAATACGCCG CCTTGGAGGA AAACCTCGGC GCGCATTTCA AAAGAGTGCT CTCTACTTCT
ACAAACGCAG AGGTAATCTC ACTAAAACTC TCTCTTTCTA AACTCGACGA ATTGCTGAAA
GAGGGGAAGA TATCGCAAGA GACATACGAA AAACTTAAGA AAGAGCTAGA GGAGTTGTTA
AAATGA
 
Protein sequence
MSVCPALRRV ESGFICSYSN KPIDPFSWYC IGNYTECPIF IRFSREEKKP AAPKPEEAPK 
PLTEVIPLAP EKAETEFEKA IKPAVDNVVL KYDDLVKKLD DMWKEYESSV IGARKQWEVE
KMTLVRAQEI LNKTIGDYEK MLAEVELKKD FMPQDAYENI KRELETKLES LKGLLDEVRS
KYAALEENLG AHFKRVLSTS TNAEVISLKL SLSKLDELLK EGKISQETYE KLKKELEELL
K