Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pisl_1079 |
Symbol | |
ID | 4618148 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pyrobaculum islandicum DSM 4184 |
Kingdom | Archaea |
Replicon accession | NC_008701 |
Strand | - |
Start bp | 972677 |
End bp | 973018 |
Gene Length | 342 bp |
Protein Length | 113 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 639784175 |
Product | hypothetical protein |
Protein accession | YP_930595 |
Protein GI | 119872588 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1676] tRNA splicing endonuclease |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.602649 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 80 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTGTTTT CTGTTGTAAT TTTTAAACAC CGACAAACAT CGGAAAATGT GGATGACGTA TTGTTAGAAC AGGTTTTCAA AGACCTTATG TCGAGAGGAT TTAAGATACT GGAGAGACTT AACGACAGAA TGTTTATCGC CGAGAAGAAG AGTAAATATC TTTTCTATGT TATGGTAGAG GGGATTGAAG TAACCACGCA GACTTTACTG AGTTTTATAA ATATGGGAGA GACTCTTTCT ATGGATACAG TTTTGGCGTT AGTAAGCAAC GATGGCACTG TCACATATTA CTTCGTCAGA AAAATTAGAC TACCGCGTAA TGTCTATGCT GAGGGTGTTT GA
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Protein sequence | MVFSVVIFKH RQTSENVDDV LLEQVFKDLM SRGFKILERL NDRMFIAEKK SKYLFYVMVE GIEVTTQTLL SFINMGETLS MDTVLALVSN DGTVTYYFVR KIRLPRNVYA EGV
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