Gene Pisl_1079 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPisl_1079 
Symbol 
ID4618148 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum islandicum DSM 4184 
KingdomArchaea 
Replicon accessionNC_008701 
Strand
Start bp972677 
End bp973018 
Gene Length342 bp 
Protein Length113 aa 
Translation table11 
GC content38% 
IMG OID639784175 
Producthypothetical protein 
Protein accessionYP_930595 
Protein GI119872588 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1676] tRNA splicing endonuclease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.602649 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones80 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTGTTTT CTGTTGTAAT TTTTAAACAC CGACAAACAT CGGAAAATGT GGATGACGTA 
TTGTTAGAAC AGGTTTTCAA AGACCTTATG TCGAGAGGAT TTAAGATACT GGAGAGACTT
AACGACAGAA TGTTTATCGC CGAGAAGAAG AGTAAATATC TTTTCTATGT TATGGTAGAG
GGGATTGAAG TAACCACGCA GACTTTACTG AGTTTTATAA ATATGGGAGA GACTCTTTCT
ATGGATACAG TTTTGGCGTT AGTAAGCAAC GATGGCACTG TCACATATTA CTTCGTCAGA
AAAATTAGAC TACCGCGTAA TGTCTATGCT GAGGGTGTTT GA
 
Protein sequence
MVFSVVIFKH RQTSENVDDV LLEQVFKDLM SRGFKILERL NDRMFIAEKK SKYLFYVMVE 
GIEVTTQTLL SFINMGETLS MDTVLALVSN DGTVTYYFVR KIRLPRNVYA EGV