| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pisl_0943 |
|---|
| Symbol | |
|---|
| ID | 4617732 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pyrobaculum islandicum DSM 4184 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_008701 |
|---|
| Strand | - |
|---|
| Start bp | 839601 |
|---|
| End bp | 840137 |
|---|
| Gene Length | 537 bp |
|---|
| Protein Length | 178 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 639784041 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_930462 |
|---|
| Protein GI | 119872455 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2411] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 40 |
|---|
| Fosmid unclonability p-value | 0.0868484 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTTTCCC CTAAATACGT AAGGCTCTTA TTCAGGGGAG AGAAAAAGAG TACTGTCAGA
CCTGGTTTAC TACGAGTTGC AGACAGAGTA TACATCCACA GCAGAGGTAA AATCGTTGCT
ATTGCCGAAG TTGAACAAGT ATCGTATAAA CGTCTCTCTG AATTGACAGA CGAAGACGCA
ATACTCGACG GTTTCAAGTC AAGAGAAGAG TTGATAGAGT ATCTAAGGAG GAGATATCCA
GGTATTAAAG ACAGCGCTAT AGTGACTATC ATACGTTTTA AAAACATTGA GAGAACAGAT
ATGCCAGAGG ATTTACAATA TGGGGGATTG ACACCTGTAG AAATCGCAAC TTTGGCATTA
AACAAGCTCA AGCTCAGTAA CCGCGAGCAA CAGATACTAA AGGCAGTTGT TGAAACAGGG
AGTATACGTA AGGCGGCTCT CAAGCTTTTT GGAACTGTTG AAAAGAGGGG GGTCATTAGG
CGAGTTTTAA GGAGAGCAGC TATAGCGTTA TTTAAAGAGG ACGTTAAAAG CGGCTAA
|
|---|
| Protein sequence | MLSPKYVRLL FRGEKKSTVR PGLLRVADRV YIHSRGKIVA IAEVEQVSYK RLSELTDEDA
ILDGFKSREE LIEYLRRRYP GIKDSAIVTI IRFKNIERTD MPEDLQYGGL TPVEIATLAL
NKLKLSNREQ QILKAVVETG SIRKAALKLF GTVEKRGVIR RVLRRAAIAL FKEDVKSG
|
|---|
| |