Gene Pisl_0881 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPisl_0881 
Symbol 
ID4617576 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum islandicum DSM 4184 
KingdomArchaea 
Replicon accessionNC_008701 
Strand
Start bp787455 
End bp788615 
Gene Length1161 bp 
Protein Length386 aa 
Translation table11 
GC content44% 
IMG OID639783977 
Productcystathionine gamma-synthase 
Protein accessionYP_930400 
Protein GI119872393 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0626] Cystathionine beta-lyases/cystathionine gamma-synthases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value0.473462 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCAGGG CGACTATAGC CGTAAGGGGT TACAGAAACT CCGACCCTTA CGGCTCGCTT 
CAGCCTCCTA TTTATCAGAC TGCATTATTT AGAATGGAGG GAGAGGCCCA GAAGTCAGAC
AGGGGATTTG ACCTCAAATA TAGCAGAGAA GAAAATCCCA CTCTACGTCC TCTTGAAGAG
GCTTTAGCTT CTCTTGAAGG AGGCGTAGAC TCACTTGCTT TTAATAGCGG CATGGCTGCC
CTATCTTCTG TGTTTTTATC TCTACTGCGT TCAGACGCAA AAATATTAGT AACGATGGAG
GCCTACGGCG CGACATTACG GCTTTTAAGT TCTCTAAGTA AATTTGGCGT AAAGATGCAA
AAGGCGTATC CAAGCACAGA CGTATATATT GAATTTCTAA AGGAGAGCAG ACCGAATGTT
GTATTTTTTG AAACAATTAC AAATCCTACG TTGAGAGTTT TAGACACTCC AGAAGTTATT
AAAGCAGCAA AAGATCTGGG GGCTACCGTA GTTGTTGACA ACACTTTTGC AACGCCTGTA
TTAATACAGC CTATATCTCA CGGCGCGGAC TTTGTTGTAC ATTCTACGTC TAAATATATC
GCTGGCCATA ACGATGTAAT AGGCGGTGTG GCTGTGGTAT CTAAACGAGA GCTACTTGAG
GAGTTGTGGG TCTGGAGAGC TATGCTTGGC GGCATTATGC AGCCGTTTGA GGCATTTCTC
ACGCTACGCG GTCTTAAAAC GCTATTTGTA AGATTTGAAC AGCAATGTAG ATCCGCAAAG
GCAGTCGCAG AGTTTTTATC TGAGCATAGC AAGGTAAGCG AAGTTATATA CCCAGGCTTG
TCCAGCCATC CAGATCATGC TATCGCAAAA AAACTTTTTG GCGATAAATT TGGCGCCGTA
GTTTCCTTTA GGGTAAAGGG CGGCAAGGAG ACAGTTATTA AATTCTTTAA GTCGTTAAGA
TTAATAACGC CAGGCCCGAG TCTTGGGGGC GTGGAAAGTA TTGCCACATA CCCTGTGGCA
AGCGCGGCCT CGCCTATTCC CGAAGAAGAT AGAAAAATCC TAGGGATAAC AGAAGATCTA
GTCAGACTTT CCGTAGGACT TGAAGATGTG AATGATATAA TCAACGACTT AGCTCAAGCT
CTTGAGAACG TAATACCATA A
 
Protein sequence
MRRATIAVRG YRNSDPYGSL QPPIYQTALF RMEGEAQKSD RGFDLKYSRE ENPTLRPLEE 
ALASLEGGVD SLAFNSGMAA LSSVFLSLLR SDAKILVTME AYGATLRLLS SLSKFGVKMQ
KAYPSTDVYI EFLKESRPNV VFFETITNPT LRVLDTPEVI KAAKDLGATV VVDNTFATPV
LIQPISHGAD FVVHSTSKYI AGHNDVIGGV AVVSKRELLE ELWVWRAMLG GIMQPFEAFL
TLRGLKTLFV RFEQQCRSAK AVAEFLSEHS KVSEVIYPGL SSHPDHAIAK KLFGDKFGAV
VSFRVKGGKE TVIKFFKSLR LITPGPSLGG VESIATYPVA SAASPIPEED RKILGITEDL
VRLSVGLEDV NDIINDLAQA LENVIP