Gene Pisl_0707 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPisl_0707 
Symbol 
ID4617396 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum islandicum DSM 4184 
KingdomArchaea 
Replicon accessionNC_008701 
Strand
Start bp644602 
End bp644892 
Gene Length291 bp 
Protein Length96 aa 
Translation table11 
GC content41% 
IMG OID639783802 
Productvacuolar H+-transporting two-sector ATPase, F subunit 
Protein accessionYP_930228 
Protein GI119872221 
COG category[C] Energy production and conversion 
COG ID[COG1436] Archaeal/vacuolar-type H+-ATPase subunit F 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value0.0445878 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATATAG TAATAGGCGA TAGGACTACA GTAGCTCTCT TTAAGCTCAT GGGGTTTGAG 
GGCAAAACTA TTGAAAGTCC AGAGGAGGCA TTAAAGTTTA TAAAAGAACG CTTGGATACA
TACGATGTAA TTTTTATAAC TTCGAAAATA GCGAAAGCTA TACGGAAGGA GCTTGACGAA
ATTAGAATGA GAAACCCACG TAAGCTTCTA GTAGAGGTTC CCAGCGTGGA AGAGGGAATG
GAGCGCGAGG TTAACTATTT GCAAATAGTA AGGCAAGTAC TCGGCGGATA A
 
Protein sequence
MHIVIGDRTT VALFKLMGFE GKTIESPEEA LKFIKERLDT YDVIFITSKI AKAIRKELDE 
IRMRNPRKLL VEVPSVEEGM EREVNYLQIV RQVLGG