| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pisl_0702 |
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| Symbol | |
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| ID | 4616910 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum islandicum DSM 4184 |
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| Kingdom | Archaea |
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| Replicon accession | NC_008701 |
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| Strand | - |
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| Start bp | 635844 |
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| End bp | 638498 |
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| Gene Length | 2655 bp |
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| Protein Length | 884 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 639783797 |
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| Product | DNA-directed RNA polymerase subunit A' |
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| Protein accession | YP_930223 |
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| Protein GI | 119872216 |
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| COG category | [K] Transcription |
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| COG ID | [COG0086] DNA-directed RNA polymerase, beta' subunit/160 kD subunit |
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| TIGRFAM ID | [TIGR02390] DNA-directed RNA polymerase subunit A' |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00638403 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 0.00894808 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGTCGTTAA GGGAGGAACT TGACACAATC CCCCGGAAGG TAATAAAGTC TATCAAGTTT
GGGATTCTCA GCCCAGAGAT GATAAGAAAG TACTCGGTAA TGGAGGTTAC AACCTCCGAA
GTTTATGACG AAGGCGGATT GCCCGTAAGA GGGGGGGTTG CCGATCGTAG ACTTGGCGTT
GCCGAGCCTG GGGCACGATG TGAAACCTGT GGTCAAACAC ATGACGTATG TCCTGGGCAT
TTTGGTCACA TAGAGTTAGT AAAACCTGTT ATACACGTCG GATTTGCGCG AATTATCTAC
GATATTTTAA GAACGACGTG TCCCAATTGT GGCCGTATTA TGTTAAAAGA CGAAGAAATA
CAGCGTTATA GAGAGAGATT GACAAAATTA AAAGGCAAAT GGAGACTATT GGCGTTGAAT
TTACATGAGA AGATTCGTAA GAAGGCTTCA GAGAGAATGA CTTGTCCACA TTGTGGCTAC
AAGAGGAATA AAATTAGGTT TGAACGGCCC TACTACTTCT ATGAGGAAAC AGAGGAGGGG
GCTTTGGTAA GACTAGATCC AGAGACTCTA AGGGATAGAC TAGCTAAAAT TCCAAATGAG
GATTTGGAAC TTCTCGGGAT AAACCCCTCT GTCGCTCGGC CGGAGTGGGC TATTTTAAAA
GTTCTACCGG TCCCGCCGCC ACATGTAAGA CCTTCTATAC AGCTTGAAAG TGGTGTTAGA
TCTGAAGACG ACTTAACACA TAAACTTGTC GATATCATCC GTATGAACGA AAAGTTAAAG
ATAGCTATTG AAACCGGCGC GCCGACTAAT GTGGTAGATA ACTTATGGGA CCTCCTACAG
TACCATATAG CCACGTACTT TGATAATGAA TTGCCAGGAA TACCTGTGGC AAAACATAGA
GGAGGTAGGC CGCTTAAAGG CATTGCCCAA CGTCTAAAAG GCAAAGAGGG TAGATTTAGA
GGGTCTCTCT CTGGAAAACG TGTAAATTTC TCGGCACGTA CAGTCATAAG CCCAGACCCT
CATATAAGTA TAAACGAGGT GGGTGTACCA TATGATGTGG CTAAAATATT GACTGTACCC
GAGAGAGTTA CGCCGTGGAA TGTTGACATA CTGCGAGAGT ACGTCATAAG AGGACCTGAG
ACTTGGCCAG GTGCAAATTA TGTAGTTACT CCAGAAGGGA GAAGAATAGA CTTACGTTAT
GTAAAAGATA GAAGAGCTCT CGCAGAAAGA CTAGCGCCAG GTTGGATCGT TGAAAGACAC
TTGAGAGATG GCGACATTGT TCTCTTTAAT AGACAGCCGA GTCTCCACAG AGTGTCCATG
ATGGGACATT TAGTAAAAGT ATTGCCGGGC AGAACCTTTA GACTGCACCT AGCTGTTTGT
CCGCCATATA ACGCCGATTT TGACGGAGAT GAAATGAATT TGCATGTGCC CCAGACTGAA
GAAGCTAGAG CTGAGGCGAG AACTTTAATG CTTGTAGAAA AACACATTAT TACTCCGCGA
TATGGCGGCG CTATTATTGG CGCTAGACAA GATTATATAA TTGGCGCATA TATCCTTTCG
CATAAGTCTA CATTTCTCAC AAAGAAAGAA GTTGCATACC TACTTGGGGC TGGCAAATCT
GTAGAGGACC CCCCCGAGCC GGCGATATTA CATCCGGTGG AGCTTTGGAC AGGTAAACAG
ATAATTTCGC ACTTCCTGCC TAAAGATTTA AACTGGGTTC AACCAACGGC GTTTAAGAGT
AAATGTCAAG ACGCATATAA ATGTAATGGC GATGAATGGA TTATTGTCAT AAATGGCAAT
TTAGTCAAGG GTGTCTTAGA CAAGAAATCT ATAGGCGCAG AACAAGTGGA TTCCCTATGG
CACAGAATTG CCCGCGATTA TCCACCAGAG ATAGCAAGAC AGTGGTTAGA TTCTTCGCTG
AGAGTATTTC TCAGATTTTT AGATCTACGT GGATTTACGT TTGGAATGGA CTCAGTATAT
CTCCCAGACG AGGCATATAA AGAATTAAAT ATGATAATAG AAGAGAGTCT AAAAAAGGCA
TATACATTAG TAGAAGAATT CAGAAGTGGA CGTTTAGAGG CTATGCCTGG CTTCACAGTG
GAGGAGACCT TTGAGAACAA GATTACAGAG ATCTTGTCAA AAGTGCGCGA AGATGCCACG
ACAGTCGTAG AGAAGTACGT TAAAAGAGAC GCCGAAGGAT ATCTAATGGC TAAAACAGGC
GCAAGAGGTA GCATTGTAAA TATTGTACAG ATGGTTGCAA CGCTAGGCCA ACAGACGATA
AGAGGAGAAC GCATAAGGCG CGGATATAGG ACTAGGGTAC TACCTCACTT TCCGGCGGGT
GATATAGGCC CCTTCGTAGG CGGCTTTGTA AAACGGTGTT TTAGATGCGG CTTAACTCCA
GTAGAGTACT TTTTCCACGC AGCTGCAGGT AGAGACGGCT TAATAGATAC AGCTGTGAGA
ACGGCGCAGT CAGGCTATAT GCAGAGACGG CTCATTAACG CACTACAGGA TGTATACACC
GCGTATGATG GCACCGTTAG ATTCGGCGGA GCTATATTAT TACAACCGCT ATACGGCGAA
GATGGCGTAG ATGTAAGTCG TTCTGATCAT GGAAAAATCG TAGATATCAA ATCGCTTAAA
CTTTGGATAA AATGA
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| Protein sequence | MSLREELDTI PRKVIKSIKF GILSPEMIRK YSVMEVTTSE VYDEGGLPVR GGVADRRLGV
AEPGARCETC GQTHDVCPGH FGHIELVKPV IHVGFARIIY DILRTTCPNC GRIMLKDEEI
QRYRERLTKL KGKWRLLALN LHEKIRKKAS ERMTCPHCGY KRNKIRFERP YYFYEETEEG
ALVRLDPETL RDRLAKIPNE DLELLGINPS VARPEWAILK VLPVPPPHVR PSIQLESGVR
SEDDLTHKLV DIIRMNEKLK IAIETGAPTN VVDNLWDLLQ YHIATYFDNE LPGIPVAKHR
GGRPLKGIAQ RLKGKEGRFR GSLSGKRVNF SARTVISPDP HISINEVGVP YDVAKILTVP
ERVTPWNVDI LREYVIRGPE TWPGANYVVT PEGRRIDLRY VKDRRALAER LAPGWIVERH
LRDGDIVLFN RQPSLHRVSM MGHLVKVLPG RTFRLHLAVC PPYNADFDGD EMNLHVPQTE
EARAEARTLM LVEKHIITPR YGGAIIGARQ DYIIGAYILS HKSTFLTKKE VAYLLGAGKS
VEDPPEPAIL HPVELWTGKQ IISHFLPKDL NWVQPTAFKS KCQDAYKCNG DEWIIVINGN
LVKGVLDKKS IGAEQVDSLW HRIARDYPPE IARQWLDSSL RVFLRFLDLR GFTFGMDSVY
LPDEAYKELN MIIEESLKKA YTLVEEFRSG RLEAMPGFTV EETFENKITE ILSKVREDAT
TVVEKYVKRD AEGYLMAKTG ARGSIVNIVQ MVATLGQQTI RGERIRRGYR TRVLPHFPAG
DIGPFVGGFV KRCFRCGLTP VEYFFHAAAG RDGLIDTAVR TAQSGYMQRR LINALQDVYT
AYDGTVRFGG AILLQPLYGE DGVDVSRSDH GKIVDIKSLK LWIK
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