| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pisl_0697 |
|---|
| Symbol | |
|---|
| ID | 4616570 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pyrobaculum islandicum DSM 4184 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_008701 |
|---|
| Strand | - |
|---|
| Start bp | 632668 |
|---|
| End bp | 633456 |
|---|
| Gene Length | 789 bp |
|---|
| Protein Length | 262 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 639783792 |
|---|
| Product | RNA polymerase, insert |
|---|
| Protein accession | YP_930218 |
|---|
| Protein GI | 119872211 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0202] DNA-directed RNA polymerase, alpha subunit/40 kD subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.00773924 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 39 |
|---|
| Fosmid unclonability p-value | 0.0619032 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCAAAAG CAACTATTGT AGAGAAAACA CCGCTGTTTT TAAAGGCAGT AATTGAGGGA
GCCTATCCCT CTCTTGTAAA TTCTATTAGA AGAGTAATAA TATCCGAACT CCCCGTCATG
GCAATAGACT ATGTCGTAAT AGTGAGCAAT ACGTCTGTAA TGTATGACGA AATGTTAGCA
CATAGACTGG GGCTTGTCCC CTTGACAACG CCGCTACAAG CCCTTCCGCC GATAGAAGAT
TGTGAAACAG GACTTGTTGA TCCATCGGAG TGTACCGTTA GGCTTATGCT CCAGATAAAC
GCGGAAAGTG ATAAAATTGT TTACTCCGGT GACTTGGTGT CAGAAAGGCC AGATGTGGTG
CCCGTATATA AGGATATACC AATTGTTAAG CTTGTAAAGG GCCAAAGTAT TATATTAGAG
GCCTATGCTA AGCTTGGCCG TGCAAAAGAA CATGCAAAAT GGCAAGCCGC ACTTGCAAGC
TACTATTACT ATCCCAGAAT TAAAGTGCTA GATGAGAAAT GCAAAGAAGA ATGTAAGGAT
ATCTGTAAAG AATTGACAAA TCCGTTTGAA TGTACTTTTA ATAAAGCTTG GACATGTAGA
GATATTTGTG GCGATAGGCT AATAGTTGAG TGGGATAGGT ATAAATATGT CTTCTGGGTT
GAATCATTTG GTAATTACGA TGTTGAGACA GCACTAAGGG AAGCCTTTAG AATCTTAAAG
AAGAAGTTTT CCGACTTTAT AACTACCTTA ACTCAGAAAG CCGGTAGTCT AGTAGAGACA
AAAGTTTAA
|
|---|
| Protein sequence | MPKATIVEKT PLFLKAVIEG AYPSLVNSIR RVIISELPVM AIDYVVIVSN TSVMYDEMLA
HRLGLVPLTT PLQALPPIED CETGLVDPSE CTVRLMLQIN AESDKIVYSG DLVSERPDVV
PVYKDIPIVK LVKGQSIILE AYAKLGRAKE HAKWQAALAS YYYYPRIKVL DEKCKEECKD
ICKELTNPFE CTFNKAWTCR DICGDRLIVE WDRYKYVFWV ESFGNYDVET ALREAFRILK
KKFSDFITTL TQKAGSLVET KV
|
|---|
| |