Gene Pisl_0696 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPisl_0696 
Symbol 
ID4617077 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum islandicum DSM 4184 
KingdomArchaea 
Replicon accessionNC_008701 
Strand
Start bp632274 
End bp632642 
Gene Length369 bp 
Protein Length122 aa 
Translation table11 
GC content43% 
IMG OID639783791 
Product50S ribosomal protein L18e 
Protein accessionYP_930217 
Protein GI119872210 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1727] Ribosomal protein L18E 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0362291 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value0.101034 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTCCTA ATCCGACCGG ACCTACAAAT AGACAGCTAA GGATGTTGGC AAGATTTCTT 
AGAAAAGCGG CTATGGCTAA CTCTGCTAAT ATATGGAGGG TAGTAGCAGA GTTCATAGAA
CGACCTAGGA GACAGAGAGT AGTAGTAAAT GTCGGTAAGT TAAATAGAGT AGCTAACGAT
GGAGATATAG TAGTAATACC GGGGAAATTA CTAGGCGGAG GAGAGCTTAA GAAAAGGATA
ATAGTTGCGT CTGTAAACGT ATCGCGCAAG GCCGCGCAGA AGGTAATTGA AGCGGGAGGA
GAGCTTTTGA CAATCCCGGA ACTAGTGAGA AGAAATCCAA AAGGAAGCAA TGTAAAGATA
GTGATATGA
 
Protein sequence
MPPNPTGPTN RQLRMLARFL RKAAMANSAN IWRVVAEFIE RPRRQRVVVN VGKLNRVAND 
GDIVVIPGKL LGGGELKKRI IVASVNVSRK AAQKVIEAGG ELLTIPELVR RNPKGSNVKI
VI