Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pisl_0696 |
Symbol | |
ID | 4617077 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pyrobaculum islandicum DSM 4184 |
Kingdom | Archaea |
Replicon accession | NC_008701 |
Strand | - |
Start bp | 632274 |
End bp | 632642 |
Gene Length | 369 bp |
Protein Length | 122 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 639783791 |
Product | 50S ribosomal protein L18e |
Protein accession | YP_930217 |
Protein GI | 119872210 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1727] Ribosomal protein L18E |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0362291 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 41 |
Fosmid unclonability p-value | 0.101034 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCCTCCTA ATCCGACCGG ACCTACAAAT AGACAGCTAA GGATGTTGGC AAGATTTCTT AGAAAAGCGG CTATGGCTAA CTCTGCTAAT ATATGGAGGG TAGTAGCAGA GTTCATAGAA CGACCTAGGA GACAGAGAGT AGTAGTAAAT GTCGGTAAGT TAAATAGAGT AGCTAACGAT GGAGATATAG TAGTAATACC GGGGAAATTA CTAGGCGGAG GAGAGCTTAA GAAAAGGATA ATAGTTGCGT CTGTAAACGT ATCGCGCAAG GCCGCGCAGA AGGTAATTGA AGCGGGAGGA GAGCTTTTGA CAATCCCGGA ACTAGTGAGA AGAAATCCAA AAGGAAGCAA TGTAAAGATA GTGATATGA
|
Protein sequence | MPPNPTGPTN RQLRMLARFL RKAAMANSAN IWRVVAEFIE RPRRQRVVVN VGKLNRVAND GDIVVIPGKL LGGGELKKRI IVASVNVSRK AAQKVIEAGG ELLTIPELVR RNPKGSNVKI VI
|
| |