Gene Pisl_0667 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPisl_0667 
Symbol 
ID4617557 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum islandicum DSM 4184 
KingdomArchaea 
Replicon accessionNC_008701 
Strand
Start bp606737 
End bp607507 
Gene Length771 bp 
Protein Length256 aa 
Translation table11 
GC content41% 
IMG OID639783761 
Productproliferating-cell nuclear antigen-like protein 
Protein accessionYP_930188 
Protein GI119872181 
COG category[L] Replication, recombination and repair 
COG ID[COG0592] DNA polymerase sliding clamp subunit (PCNA homolog) 
TIGRFAM ID[TIGR00590] proliferating cell nuclear antigen (pcna) 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.355101 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value0.237552 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTTGTTA GGGCTTTATT TCCAAAGGGG AAAGAGCCAC GCTATGCATT TGAGGTGCTC 
ATTAAAACTC TACCAGAGGC GTCCCTAATT TTCTCCCAAG AGGGTATTGT ACTCAAAGCG
CTCGATCCTA CAAAGACCGT GCTATTTGAT TTAATATTTC ACGCCGCATC TCTTGAGGAT
TATTTTATAG AGGAGGAAAC AAGGGTAGGC CTCATCTTTA CCACAATAAA AGACGTCATT
AAGCGTATAG GTGCGACAGA AAAACTAGAG CTAGAGGTCG ATAAAGAGAA TAATAGATTC
TCCCTATATG TATATCCAAA GAGAGGGAAG GAGGTCGGCT TAACAAGACG TTTTTCATTT
CCAATAGTAC AGGTAGTTGA AGAAGAAGTT CCAGAGCTCG CGTTAACCTT TGAAGCATCT
TTTGAGATAG ACTCCGGCGT TTTTGACGAC ATATTATCTA TGGTAGAGGA GGTATCTGAT
TGGATACAGA TAACGGCGAT GCCAGACAAA GTTATATTTA AAGGCATTGG CGAAGGCGGA
AAAGTTGCTG AGGCTGAGTT AAGTCAAGAG AGTGAGTCTA TATTCAATAT CTCGTTGGAA
AATTCGGCGT CTTCAAAATA TAGCGTAGAG ACGCTTAAAG ACATCAGCAG TAAGATGAAG
AGTTTGTCTA AACGTGTTAA GGTTGAGCTC TCATCAAATA AACCACTTAA GTTGACGTAT
GAATTCACCA CGGGGACTTT TACGGCGGTT ATAGCACCTA GAGTAGACTA A
 
Protein sequence
MVVRALFPKG KEPRYAFEVL IKTLPEASLI FSQEGIVLKA LDPTKTVLFD LIFHAASLED 
YFIEEETRVG LIFTTIKDVI KRIGATEKLE LEVDKENNRF SLYVYPKRGK EVGLTRRFSF
PIVQVVEEEV PELALTFEAS FEIDSGVFDD ILSMVEEVSD WIQITAMPDK VIFKGIGEGG
KVAEAELSQE SESIFNISLE NSASSKYSVE TLKDISSKMK SLSKRVKVEL SSNKPLKLTY
EFTTGTFTAV IAPRVD