Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pisl_0594 |
Symbol | |
ID | 4617638 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pyrobaculum islandicum DSM 4184 |
Kingdom | Archaea |
Replicon accession | NC_008701 |
Strand | + |
Start bp | 543742 |
End bp | 544836 |
Gene Length | 1095 bp |
Protein Length | 364 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 639783686 |
Product | major facilitator transporter |
Protein accession | YP_930115 |
Protein GI | 119872108 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.00448971 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.00000771738 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGAATCTCA GGCTTATACT CATTCTTGGC CTAGTATCGC TTCTTGCCGA CTGGCTTTAT GAGAGCGTGC GTGCCGTAGT TCCGCAGTAT CTATACTACC TAGGCGCTTC TGCGGTTTTT GTAGGCTTTG TCTTTGGCCT TGGCGATGCC TTGGGCTACG CTGCTAGGTT TATAACAGGC CCGCTTGCTG ATAAAAGAGG GGGTTACTGG CTTGAGACTT TCCTTGGTTA TGCGTTGCAA GTGGCGGCAG TGGCGGGGCT TGTGTTTGCT AGAGATATGT GGCAAGTTGC TGGCCTGATA TTTTTGGAGA GGTTTAGCAA GGCGTTGCGT ACGCCGGCGC GTGACGCAAT AATTTCCGCG GCGGGGGGAG CGGAAGCTAG GGGGAGGGCA TTTGGCATAC ATGCCTCTCT TGACCAAATT GGGGCGATTA TTGGTGTAGC TATGGCGACG GCGATGTTAT ATTATAAATT CACGCCACGC GACGTATTTC TCATATCGCT TGCTCCAGGG GTTGCCGCAT TATTTACGCT GTATGTGGCA TATAGGGTTG GCAAATTAAA GCCGGAGAAG AGGAAGTCTA CAATCCTTAT GGATTTAACT GTTTTTAAAT TTGGCGTGAC CCAATTTCTC TTGGGGCTAT CTCTAATTCA CATATCTCTT TTCATGTATA AACTCGCTGA AGTTGCTTGG ATGGCCTCGC TTCTTTATCT AGTCGCTATG GTTTCGGAGG TGCCTGTGTC TTTGCTACTG GGGCATTTCT ATGATAAGAA TGCCAAAGCC CTATTGGTCG CTCCACTTTT CTCAATCCTG TTGGCGGCTA TTTTTGTGGC TGGAAATATT CCAGCGTTGT TCTTAGGTGC CGTGCTTTAT TCTGTTGTGA CGTCATACGC AGACGTGGTT GCGAAAGCAC ACGCCGCTAG ACTTGGGGGC GCGACGTCGC TGGGCGTGAT AAATGCTATG TGGGGCTTTG GTCTTCTCGT AGGCGGTATT TTATATGGCT ACTTCTTTGA CATAGGTGCA AGTATTCCGA TTTTTATATT AGCCACTGCT TCGGCTTTTA TCTCTTTGGT GTTACTATGG CGAGAGAATA CTTAA
|
Protein sequence | MNLRLILILG LVSLLADWLY ESVRAVVPQY LYYLGASAVF VGFVFGLGDA LGYAARFITG PLADKRGGYW LETFLGYALQ VAAVAGLVFA RDMWQVAGLI FLERFSKALR TPARDAIISA AGGAEARGRA FGIHASLDQI GAIIGVAMAT AMLYYKFTPR DVFLISLAPG VAALFTLYVA YRVGKLKPEK RKSTILMDLT VFKFGVTQFL LGLSLIHISL FMYKLAEVAW MASLLYLVAM VSEVPVSLLL GHFYDKNAKA LLVAPLFSIL LAAIFVAGNI PALFLGAVLY SVVTSYADVV AKAHAARLGG ATSLGVINAM WGFGLLVGGI LYGYFFDIGA SIPIFILATA SAFISLVLLW RENT
|
| |