Gene Pisl_0584 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPisl_0584 
Symbol 
ID4617117 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum islandicum DSM 4184 
KingdomArchaea 
Replicon accessionNC_008701 
Strand
Start bp534417 
End bp534779 
Gene Length363 bp 
Protein Length120 aa 
Translation table11 
GC content42% 
IMG OID639783674 
Producttranslation initiation factor SUI1 
Protein accessionYP_930105 
Protein GI119872098 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0023] Translation initiation factor 1 (eIF-1/SUI1) and related proteins 
TIGRFAM ID[TIGR01158] translation initation factor SUI1, putative, prokaryotic 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.00019387 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGAGATAA AACTTCCAAA CCAAGACGCC GAAGACATCA TAGACCAACT GTTGGGCGGC 
TCTGAGGAAG AGACGTTAAT GCAGACGCTT ACTAAAGAAA AGGCGTTAGT TAGAATAAGG
TTAGAAAACC GGAGGGGGCA TTACGTAACT ATAGTAGATT TTGGAAATTC AGAAGACGCA
AAACAATTGG GCATAAAAGA CATGGCCAGA GAGTTAAAAA AGAGACTAGC CGCAGGCGGC
ACTATAAGAG ACAGTTGGAT TGAAATACAG GGCGACCACC GTCAGAAAAT CAAGAAGATA
TTAATAGAAA TGGGCTTTAG AGAAGAAAAC ATACTTATCG ATGAGGGAAT CACTGAGACA
TAG
 
Protein sequence
MEIKLPNQDA EDIIDQLLGG SEEETLMQTL TKEKALVRIR LENRRGHYVT IVDFGNSEDA 
KQLGIKDMAR ELKKRLAAGG TIRDSWIEIQ GDHRQKIKKI LIEMGFREEN ILIDEGITET