Gene Pisl_0512 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPisl_0512 
Symbol 
ID4618119 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum islandicum DSM 4184 
KingdomArchaea 
Replicon accessionNC_008701 
Strand
Start bp478150 
End bp478947 
Gene Length798 bp 
Protein Length265 aa 
Translation table11 
GC content43% 
IMG OID639783602 
Producthypothetical protein 
Protein accessionYP_930033 
Protein GI119872026 
COG category[S] Function unknown 
COG ID[COG2006] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value0.0639953 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGTTGACG CATATCCGGC GGACGCCGAG ATTCCAATAC CAAAGAGAGA CGCATTAATA 
ATACTGGCGG TGCACAGCTA TATACCATCT CAAGCGAACC CCCGTCCCGA GCTGATAGAG
ACTTTACTAC AGACTCTGCA AGGGAGGGAC GTATCTATAA CATTCTCCAT GCCTAAGTCT
TATTTTGAAA AAGCAGTGAA AATTATGGGC TTGGAAAAAC TTGCCGCTAA ATACGGCGCT
AGAATAATAC AGCCTCAACA ACATGTGGAC TATAAGATAG AACTTGAAAC GTCTAGAGGC
ACAAAAATTA CCGTTAGGGC GCTCAGGGCG GCTTTCGAAG AGTCTCTCAC AAAAATAGTT
GTAGCAATAC CTGTAAGCCA CCCTCAGACT ATTCTGTATT TAACAATGCC CACCGCCGCT
CTACAAGTAC TAGAGCCAAA AGACGCACAA AATCTTTACG AAGGTTTTAG AGCGCTTTAT
AAATATATTG CAAATATCTA CAAATTAGAA AAAAACACCT TTTGTCTTAC AGATGGTAAA
TTTGTCATTG AGGGCGATGG ACCCATAAAG GGATTTCAGA GATACTGGGG GGTGATAGTA
ACCGGCGAAA ACTGTGGCGA AGTTGACTAT ATAACAGCGC AAGCCCTTGG CGTAAACCCA
GAGGACTTGG GCTACCTATA TTTCTACTTC GGTGGCTCTT GGCCAAAGAT AAAGCCGCCA
AGGCTTCTGG AAGAAAACAA AATTCAAATA AAGCTTACGA GTAATATCGG GATACTCCTC
AGTTGGAAAA GAGGATAA
 
Protein sequence
MVDAYPADAE IPIPKRDALI ILAVHSYIPS QANPRPELIE TLLQTLQGRD VSITFSMPKS 
YFEKAVKIMG LEKLAAKYGA RIIQPQQHVD YKIELETSRG TKITVRALRA AFEESLTKIV
VAIPVSHPQT ILYLTMPTAA LQVLEPKDAQ NLYEGFRALY KYIANIYKLE KNTFCLTDGK
FVIEGDGPIK GFQRYWGVIV TGENCGEVDY ITAQALGVNP EDLGYLYFYF GGSWPKIKPP
RLLEENKIQI KLTSNIGILL SWKRG