Gene Pisl_0412 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPisl_0412 
Symbol 
ID4617643 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum islandicum DSM 4184 
KingdomArchaea 
Replicon accessionNC_008701 
Strand
Start bp400162 
End bp400821 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content61% 
IMG OID639783492 
Producthypothetical protein 
Protein accessionYP_929933 
Protein GI119871926 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones58 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTGTCGA GTTTGTATAA CGACCTGGCG TTAGCCTCTG CGCTCGGCGC CTGGGTCGCC 
TTCGTAGCCC TTGGGTTGAC GAGGTGGCTC TATAAGCCGC TGTCTCGCCT AGGGCACATG
AGGGCGGTGT ATTTCAACCG GAAGGTTATC CACGTGCTAG CCGGCGGCGT AGTGGCGGTG
TTGGTCCCAA GTTTTTCAAG CTGGGTGGTT CCCGCGGCCA CAGCGTTTTT AATCGCTGTG
TTGCTCTACA TACCGCATAG GACCGGCCGG CTCCTCTGGT GGTTTCAAGA CCCCGGCAAT
ATGTACGAGG TCTCCTTCGC AGTTATGTGG GGGGTCGTGG TGGCCGCGAG CTGGGGCCTT
TTGGGGGACT GGCGCTTGGG CGTTGTGCCG GCGCTCTTTA TGGCCGTGGG CGACTCGGCC
ACGGGCGTCG TAAGAAACCT CCTGTTTGGG AGGAGGACGA AGCACTGGGT GGGCAATTTA
GCCATGGCGG CTGTTTCCAT ACCCATCGGC TGGCACTACC TAGGGGCCGC GGGGGCGGTC
GCGGCGGTCT TGGCCAGCTT TGTGGAGAGG TTTGAGTTCC CGCCTATAGA CGACAACGTG
CTTGTGCCTC TGGCGTCGTT TGTCTTCCTA CTCACGTGGG ACGCACTCTC CCCACTATAG
 
Protein sequence
MVSSLYNDLA LASALGAWVA FVALGLTRWL YKPLSRLGHM RAVYFNRKVI HVLAGGVVAV 
LVPSFSSWVV PAATAFLIAV LLYIPHRTGR LLWWFQDPGN MYEVSFAVMW GVVVAASWGL
LGDWRLGVVP ALFMAVGDSA TGVVRNLLFG RRTKHWVGNL AMAAVSIPIG WHYLGAAGAV
AAVLASFVER FEFPPIDDNV LVPLASFVFL LTWDALSPL