Gene Pisl_0408 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPisl_0408 
Symbol 
ID4617551 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum islandicum DSM 4184 
KingdomArchaea 
Replicon accessionNC_008701 
Strand
Start bp394413 
End bp395417 
Gene Length1005 bp 
Protein Length334 aa 
Translation table11 
GC content53% 
IMG OID639783488 
Productputative RNA methylase 
Protein accessionYP_929929 
Protein GI119871922 
COG category[L] Replication, recombination and repair 
COG ID[COG0116] Predicted N6-adenine-specific DNA methylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones52 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGATATT TAATAACTAC AGTCCCAGGA CTCGAAGACT TTGTAATAGA AGAATCGGCG 
GAGCGGCTCT CGGCAAAAAC TGCAAAAGCC ATATACATGA CAGGACGCGT AATCGTAGAG
ACAGAGGCAG AACCACACGC CCTATACAGT TTAAAAACTG CAGAGAGGTT CGGCATATTC
CTAGGCGAGG GGCTAGCAGA GACACTACAA GAGGTGGTAA ACACGGCGTC GACATATCTA
CCACACGTCT TGAAATACCT CACAAAAAAC ACAACCGTAG GCATACGTTG CGAAAGAGTA
GGCCAACACC CCTTCACCTC ACGCGACGTA GAGAGAGAAG TGGGGAGGTG GCTAAAGGAG
AGGGGGTACG TCATCAGCCT AGTCGACCCA GACGTCGAGA TAAACGTCGA CGTAGTACAC
AACTACGTCA CAGTCTGGAT CACCGTAGCT AAAAAAAGCC TCAAAGACAG GCCCTGGCGC
GCCTATGAGC ACTACGCCAG CCTAAACCCC ATAATCGCCC ACGCCATGGC CAGACTCGCC
AAGCCAGCCC CCGGGGAGAC CATATGCGAT CTGACATGCG GCGGCGGAAC CATAGCCGCA
GAGGCGGCCG AATACGCCCC CTGGGCCAGA TACATATGCG TAGACATATC CCTAAAACAC
ATAAAAGGCG CCGCCTTAAA CACGGCGCGG TACCCCCAGG TAGACCTCCT CTGGTTCGAC
TCCACCAAAC TACATAGAGC AATACGCCCC ATATGCGACA AATACATATT CAACCCCCCA
TACGGCTTCA GAATACCCGG CAAGATAGGA AAGCTATACC ACCTCCTCGG AAAAGCCATG
CGCAAACTCA CCCGCCACTG CGCCACCTAC GTCACAATAA CCCCCAGACA CAAAACCTTC
ACAAGCCAAG TAGGAGGCGA GATAATCATG AGAAGAGTCA TATACCAAGG AGGCCTATAC
AGCAGCATCA TAGTGGGGAG AATATGCCCC ACCTCGTCCC CCTAA
 
Protein sequence
MRYLITTVPG LEDFVIEESA ERLSAKTAKA IYMTGRVIVE TEAEPHALYS LKTAERFGIF 
LGEGLAETLQ EVVNTASTYL PHVLKYLTKN TTVGIRCERV GQHPFTSRDV EREVGRWLKE
RGYVISLVDP DVEINVDVVH NYVTVWITVA KKSLKDRPWR AYEHYASLNP IIAHAMARLA
KPAPGETICD LTCGGGTIAA EAAEYAPWAR YICVDISLKH IKGAALNTAR YPQVDLLWFD
STKLHRAIRP ICDKYIFNPP YGFRIPGKIG KLYHLLGKAM RKLTRHCATY VTITPRHKTF
TSQVGGEIIM RRVIYQGGLY SSIIVGRICP TSSP