| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pisl_0341 |
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| Symbol | |
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| ID | 4617514 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum islandicum DSM 4184 |
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| Kingdom | Archaea |
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| Replicon accession | NC_008701 |
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| Strand | + |
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| Start bp | 337884 |
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| End bp | 338438 |
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| Gene Length | 555 bp |
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| Protein Length | 184 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 639783421 |
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| Product | THUMP domain-containing protein |
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| Protein accession | YP_929862 |
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| Protein GI | 119871855 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1818] Predicted RNA-binding protein, contains THUMP domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 67 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTTATA AAATGTCTTT AGAGAGGTCT ATGAGTTGGA ATTTAGTTGT AGCCACCGGC
TGGCGGCAGG AGAGACTATG TTTGGAGGAG TTGTATAGAG TTGGCGATAT CGTTGGAAGA
CGAGTTGAGG AGGTTTGGTT CACTGGGTTT GACGGCTTGT TAACTGCCAA AGTAGAGGGG
GACCCTGTGG AGTTTGTCAA AATGCTCATA GATGTGGTTA AAAGCGGCTA TTATATACCT
AGGTATATCC TTAGAGTGAC GCCTATTATG ACTGTTGTAA AGACCGATTT AGACGAAATA
CAGAAGGCCG TGGGCGAGCT GGCCGAACGC TATATTGCGC CACAGGAGAG TTTCAAAATT
GAGCTTAAGA AGAGGGGCGT GAAGTTCGAC CGCATGTCGG TTATTGAATA TGTCGCCAGA
GCGGTCAACC GGAGGGTAGA TTTGACAAAA CCTGACAAAG TCGTGTGGAT TGAGATGTTC
CCTAGCAGAA CCGGCATCTC TGTAATTAGA GAGGATGAGA CCTTCTCACT TATGAGATCT
AGATCTGCCA CATGA
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| Protein sequence | MFYKMSLERS MSWNLVVATG WRQERLCLEE LYRVGDIVGR RVEEVWFTGF DGLLTAKVEG
DPVEFVKMLI DVVKSGYYIP RYILRVTPIM TVVKTDLDEI QKAVGELAER YIAPQESFKI
ELKKRGVKFD RMSVIEYVAR AVNRRVDLTK PDKVVWIEMF PSRTGISVIR EDETFSLMRS
RSAT
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