| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pisl_0335 |
|---|
| Symbol | |
|---|
| ID | 4617330 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pyrobaculum islandicum DSM 4184 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_008701 |
|---|
| Strand | - |
|---|
| Start bp | 333207 |
|---|
| End bp | 333740 |
|---|
| Gene Length | 534 bp |
|---|
| Protein Length | 177 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 639783414 |
|---|
| Product | NADH dehydrogenase (ubiquinone), 30 kDa subunit |
|---|
| Protein accession | YP_929856 |
|---|
| Protein GI | 119871849 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0852] NADH:ubiquinone oxidoreductase 27 kD subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.29537 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 74 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCGGCGA AAATACCACC CAAGTGCCCA CCCCCTGCCG ACCACCCGTT GCTTGAGAAA
CTAAAGGCGG CGTTGGGAGA CGCCATCTTG AACCACGGCG TGACGCCAGA GGGCCACCTA
TGTCTCATGG TGCCCCCCGG AAAGGTGAGA GAAGTCGCTA CCAAGCTAAA GGAGTTGGGC
TTCGACCATG TCCTTTCCCT AAGCGCCGTG GACTACATGG CCGAAGGCAA GTTCTTGGTG
ACGTATGTCT ACGCTTCATA CCTAAACCCA GACCTCAAAA ACCAGCTCCT ACACGTCAGA
GCTGAGATAC CCCGCAACGA CCCCAAGATA GCCTCTATAG CCGATATATA TCCCTCGGCG
GACTACGACG AGAGAGAGTG CCACGAGATG TTCGGCATAT GGTTCGAAGG AAACCCACAC
ATGGGCAAAC GCTTCTTACT AGACCCAGAC TGTTGCATAG ATGAAAAAAC AGGCAAACCC
CTCTACCCAC TACGTAAGGA CTTCAAAGTG CCAGACTGGG GGCTGATGGG CTAA
|
|---|
| Protein sequence | MSAKIPPKCP PPADHPLLEK LKAALGDAIL NHGVTPEGHL CLMVPPGKVR EVATKLKELG
FDHVLSLSAV DYMAEGKFLV TYVYASYLNP DLKNQLLHVR AEIPRNDPKI ASIADIYPSA
DYDERECHEM FGIWFEGNPH MGKRFLLDPD CCIDEKTGKP LYPLRKDFKV PDWGLMG
|
|---|
| |