Gene Pisl_0328 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPisl_0328 
Symbol 
ID4617254 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum islandicum DSM 4184 
KingdomArchaea 
Replicon accessionNC_008701 
Strand
Start bp327040 
End bp328002 
Gene Length963 bp 
Protein Length320 aa 
Translation table11 
GC content49% 
IMG OID639783407 
Productrespiratory-chain NADH dehydrogenase, subunit 1 
Protein accessionYP_929849 
Protein GI119871842 
COG category[C] Energy production and conversion 
COG ID[COG1005] NADH:ubiquinone oxidoreductase subunit 1 (chain H) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones72 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCATTC CAAGCGATAT ATTTGCCGCC GTTGTATTTC CAGGGGTAAT GGGAGTCTTC 
GGATTTTTAG TAGTGGCTAT TTGGCTAGAG AGAAAACTTG TGGCTAGAGT CCAATGGCGC
TACGGTCCCC TATATGTGTC TAGAAGATTT GGCGGATTTC TCCAGCCGAT CGCCGACCTT
GTCAAACTTG TTTTTTCCGA ACTTGTGCTA CCTACTCACA CCAATAGAGC TCTCTTCGCC
GTCGCCCCCA TTATCTTATT TTTCGCAGAG GCCATCCCCC TGGTTTTTAT AGCGGCGGCG
CCGGGGTTTG TCGTTGTTTA TCATCCCCAC GGCTTAGCTA TCGCCCTGGT GTTAATACTG
CTTGTGGCCG TGCTTGTGGT GGCCATGGCT TGGACTGAAG CAGATAAGTT CACCTACATT
GGGGCGGTGA GAGAAATACT TCTAACCGCG GCGTATGAAG CACCCCTCCT CCTATCGGCT
TTAGCCATGT TTCTACTCTA TAAATCTGCA GATCCCTTTG GCGTTGTAGA GACCCAGAGA
GAGCTATGGG GCATCTTCTT AAACCCGCTG GCGTTTGTCA CATATTTTGT GACTCTACTC
ATGGCTACGA CTAGGCTACC TTTTGAAATA CCAGAGGCCG AGCCCGAGGT AGTGTTAGGG
CCATATACAG AATACGGCTC CACACTTTTT ATCTACGCCT TTGGCTCTAA CTATGTCAAA
CTATACACTC TTTCGTTACT CGGCACGGTG TTATTTCTCG GCGGCTGGAC TCCAGCAGAT
GGCCTCCTTG GCGTGGTTAT TACAGCAGTA AAAATGGCAG TGTTTATCAT CCCTGCCCTC
TTGGTAAGAG CTATCTACCC TCGCTACAGA ATTGACCAGG CGCTGGAGTT AGGCTGGGGC
AAGTTATTAG TGCTCTCAAT AGTTGCTGTG GCCTGGTCTC TTGTATTGCT ATGGTTGCGT
TAG
 
Protein sequence
MFIPSDIFAA VVFPGVMGVF GFLVVAIWLE RKLVARVQWR YGPLYVSRRF GGFLQPIADL 
VKLVFSELVL PTHTNRALFA VAPIILFFAE AIPLVFIAAA PGFVVVYHPH GLAIALVLIL
LVAVLVVAMA WTEADKFTYI GAVREILLTA AYEAPLLLSA LAMFLLYKSA DPFGVVETQR
ELWGIFLNPL AFVTYFVTLL MATTRLPFEI PEAEPEVVLG PYTEYGSTLF IYAFGSNYVK
LYTLSLLGTV LFLGGWTPAD GLLGVVITAV KMAVFIIPAL LVRAIYPRYR IDQALELGWG
KLLVLSIVAV AWSLVLLWLR