Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pisl_0328 |
Symbol | |
ID | 4617254 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pyrobaculum islandicum DSM 4184 |
Kingdom | Archaea |
Replicon accession | NC_008701 |
Strand | + |
Start bp | 327040 |
End bp | 328002 |
Gene Length | 963 bp |
Protein Length | 320 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 639783407 |
Product | respiratory-chain NADH dehydrogenase, subunit 1 |
Protein accession | YP_929849 |
Protein GI | 119871842 |
COG category | [C] Energy production and conversion |
COG ID | [COG1005] NADH:ubiquinone oxidoreductase subunit 1 (chain H) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 72 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTCATTC CAAGCGATAT ATTTGCCGCC GTTGTATTTC CAGGGGTAAT GGGAGTCTTC GGATTTTTAG TAGTGGCTAT TTGGCTAGAG AGAAAACTTG TGGCTAGAGT CCAATGGCGC TACGGTCCCC TATATGTGTC TAGAAGATTT GGCGGATTTC TCCAGCCGAT CGCCGACCTT GTCAAACTTG TTTTTTCCGA ACTTGTGCTA CCTACTCACA CCAATAGAGC TCTCTTCGCC GTCGCCCCCA TTATCTTATT TTTCGCAGAG GCCATCCCCC TGGTTTTTAT AGCGGCGGCG CCGGGGTTTG TCGTTGTTTA TCATCCCCAC GGCTTAGCTA TCGCCCTGGT GTTAATACTG CTTGTGGCCG TGCTTGTGGT GGCCATGGCT TGGACTGAAG CAGATAAGTT CACCTACATT GGGGCGGTGA GAGAAATACT TCTAACCGCG GCGTATGAAG CACCCCTCCT CCTATCGGCT TTAGCCATGT TTCTACTCTA TAAATCTGCA GATCCCTTTG GCGTTGTAGA GACCCAGAGA GAGCTATGGG GCATCTTCTT AAACCCGCTG GCGTTTGTCA CATATTTTGT GACTCTACTC ATGGCTACGA CTAGGCTACC TTTTGAAATA CCAGAGGCCG AGCCCGAGGT AGTGTTAGGG CCATATACAG AATACGGCTC CACACTTTTT ATCTACGCCT TTGGCTCTAA CTATGTCAAA CTATACACTC TTTCGTTACT CGGCACGGTG TTATTTCTCG GCGGCTGGAC TCCAGCAGAT GGCCTCCTTG GCGTGGTTAT TACAGCAGTA AAAATGGCAG TGTTTATCAT CCCTGCCCTC TTGGTAAGAG CTATCTACCC TCGCTACAGA ATTGACCAGG CGCTGGAGTT AGGCTGGGGC AAGTTATTAG TGCTCTCAAT AGTTGCTGTG GCCTGGTCTC TTGTATTGCT ATGGTTGCGT TAG
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Protein sequence | MFIPSDIFAA VVFPGVMGVF GFLVVAIWLE RKLVARVQWR YGPLYVSRRF GGFLQPIADL VKLVFSELVL PTHTNRALFA VAPIILFFAE AIPLVFIAAA PGFVVVYHPH GLAIALVLIL LVAVLVVAMA WTEADKFTYI GAVREILLTA AYEAPLLLSA LAMFLLYKSA DPFGVVETQR ELWGIFLNPL AFVTYFVTLL MATTRLPFEI PEAEPEVVLG PYTEYGSTLF IYAFGSNYVK LYTLSLLGTV LFLGGWTPAD GLLGVVITAV KMAVFIIPAL LVRAIYPRYR IDQALELGWG KLLVLSIVAV AWSLVLLWLR
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