Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pisl_0317 |
Symbol | |
ID | 4617119 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pyrobaculum islandicum DSM 4184 |
Kingdom | Archaea |
Replicon accession | NC_008701 |
Strand | + |
Start bp | 316388 |
End bp | 317359 |
Gene Length | 972 bp |
Protein Length | 323 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 639783395 |
Product | inner-membrane translocator |
Protein accession | YP_929838 |
Protein GI | 119871831 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0559] Branched-chain amino acid ABC-type transport system, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 71 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACAAAT CTACTGTCTT TTGGCTTATT GTTATTCTAC TGGCGGCGGG TTGGCTTTTC TCACTTATAT ATTCCACACG TTTGGCGGTC GACGGTGTGA TGTACTCAAG CATATTGGCA TTAGCTGCCG TAGGTTTGAC AATGACCTAC ATCACTACAA AAGTTCCCAA CTTTGCACAC GGCGCTATAA TGGGAGTAGG CACACTTACT GCGCTTGCGT TAAGCCAGAA ATTTGGAATC TCGCCCTACG TCGCTGGACT TATTGCATTG CCTTTTTCTA TCGCCATCTC GGTTGTATTG TATTATACAC TCATGCCAAT ATATAAGCGC GGCGCCTCTC CCACAATTCT CATGATGGCG TCTATGGCGT ATAACATCAT AATTCTAGGC GCGTTAAATG CAATAGCAGA TTACCTCGGC AGAATATGGG GTATCTTCAC CAGAGGCTAT ACGCTTAGGA GTATGGATTT TAACATAGGA GACTTTCCAG GCCTTGCAAT TATTGGCCCG CTTTCTGTTG CCCTCACCTC AGCGGTTTTA TATATTTTTC TCGTAAAAAC TAAGCTTGGC ATAGCGTTAA GAGCTGCTGT AGAAAACGAA GAACTCGCCA GGTCTTTAGG TATAGACGTA GATAGAGCCT ATCTAGTGGC TTGGATTATC GCCGGCGTAT TAGCTGGATA CTCCGGTGCT GTGTTAACTC TTTATCTCTC CGTAGAGCCA GATACAGGTT GGATGATTCT TGCAAATATC TTCGCCGCTA GTATAGCCGG CGGCCTTAGT AATATATTTG GAGCTGTATT AGGCGCCTTC TTCATGGGCT TTGTGGAAGT ACCACTTGCC ACATATATTG CGTCTATTGT TGCCATAGAA CCGTATGTAG TACTTCAGTA TAGGCCTCTC CTACCGCTTA TAGCAGTGGC TCTTTTCCTA ATTATAATAC CACAGGGATT GACCTCTCTT AGAAGGAGAT GA
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Protein sequence | MNKSTVFWLI VILLAAGWLF SLIYSTRLAV DGVMYSSILA LAAVGLTMTY ITTKVPNFAH GAIMGVGTLT ALALSQKFGI SPYVAGLIAL PFSIAISVVL YYTLMPIYKR GASPTILMMA SMAYNIIILG ALNAIADYLG RIWGIFTRGY TLRSMDFNIG DFPGLAIIGP LSVALTSAVL YIFLVKTKLG IALRAAVENE ELARSLGIDV DRAYLVAWII AGVLAGYSGA VLTLYLSVEP DTGWMILANI FAASIAGGLS NIFGAVLGAF FMGFVEVPLA TYIASIVAIE PYVVLQYRPL LPLIAVALFL IIIPQGLTSL RRR
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