Gene Pisl_0317 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPisl_0317 
Symbol 
ID4617119 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum islandicum DSM 4184 
KingdomArchaea 
Replicon accessionNC_008701 
Strand
Start bp316388 
End bp317359 
Gene Length972 bp 
Protein Length323 aa 
Translation table11 
GC content45% 
IMG OID639783395 
Productinner-membrane translocator 
Protein accessionYP_929838 
Protein GI119871831 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0559] Branched-chain amino acid ABC-type transport system, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones71 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACAAAT CTACTGTCTT TTGGCTTATT GTTATTCTAC TGGCGGCGGG TTGGCTTTTC 
TCACTTATAT ATTCCACACG TTTGGCGGTC GACGGTGTGA TGTACTCAAG CATATTGGCA
TTAGCTGCCG TAGGTTTGAC AATGACCTAC ATCACTACAA AAGTTCCCAA CTTTGCACAC
GGCGCTATAA TGGGAGTAGG CACACTTACT GCGCTTGCGT TAAGCCAGAA ATTTGGAATC
TCGCCCTACG TCGCTGGACT TATTGCATTG CCTTTTTCTA TCGCCATCTC GGTTGTATTG
TATTATACAC TCATGCCAAT ATATAAGCGC GGCGCCTCTC CCACAATTCT CATGATGGCG
TCTATGGCGT ATAACATCAT AATTCTAGGC GCGTTAAATG CAATAGCAGA TTACCTCGGC
AGAATATGGG GTATCTTCAC CAGAGGCTAT ACGCTTAGGA GTATGGATTT TAACATAGGA
GACTTTCCAG GCCTTGCAAT TATTGGCCCG CTTTCTGTTG CCCTCACCTC AGCGGTTTTA
TATATTTTTC TCGTAAAAAC TAAGCTTGGC ATAGCGTTAA GAGCTGCTGT AGAAAACGAA
GAACTCGCCA GGTCTTTAGG TATAGACGTA GATAGAGCCT ATCTAGTGGC TTGGATTATC
GCCGGCGTAT TAGCTGGATA CTCCGGTGCT GTGTTAACTC TTTATCTCTC CGTAGAGCCA
GATACAGGTT GGATGATTCT TGCAAATATC TTCGCCGCTA GTATAGCCGG CGGCCTTAGT
AATATATTTG GAGCTGTATT AGGCGCCTTC TTCATGGGCT TTGTGGAAGT ACCACTTGCC
ACATATATTG CGTCTATTGT TGCCATAGAA CCGTATGTAG TACTTCAGTA TAGGCCTCTC
CTACCGCTTA TAGCAGTGGC TCTTTTCCTA ATTATAATAC CACAGGGATT GACCTCTCTT
AGAAGGAGAT GA
 
Protein sequence
MNKSTVFWLI VILLAAGWLF SLIYSTRLAV DGVMYSSILA LAAVGLTMTY ITTKVPNFAH 
GAIMGVGTLT ALALSQKFGI SPYVAGLIAL PFSIAISVVL YYTLMPIYKR GASPTILMMA
SMAYNIIILG ALNAIADYLG RIWGIFTRGY TLRSMDFNIG DFPGLAIIGP LSVALTSAVL
YIFLVKTKLG IALRAAVENE ELARSLGIDV DRAYLVAWII AGVLAGYSGA VLTLYLSVEP
DTGWMILANI FAASIAGGLS NIFGAVLGAF FMGFVEVPLA TYIASIVAIE PYVVLQYRPL
LPLIAVALFL IIIPQGLTSL RRR