Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pisl_0312 |
Symbol | |
ID | 4618087 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pyrobaculum islandicum DSM 4184 |
Kingdom | Archaea |
Replicon accession | NC_008701 |
Strand | + |
Start bp | 310923 |
End bp | 312296 |
Gene Length | 1374 bp |
Protein Length | 457 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 639783390 |
Product | peptidase U62, modulator of DNA gyrase |
Protein accession | YP_929833 |
Protein GI | 119871826 |
COG category | [R] General function prediction only |
COG ID | [COG0312] Predicted Zn-dependent proteases and their inactivated homologs |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 80 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGAGCTAC TTGTAAAAGC GCTCGACTAC GGTCGTTCTC TAGGTGCTAC ATATGTTGAA GTGAGGTGGC AAAAAGACTA TGGCTCCGTG GCGGCTGTGA GAAACGGTCA GTTTGAATTC TTAGCTACGT TCTCTTCCGA GGGGATTGCA ATAAGAGCAA TTGCAGAAGG CGGCTTGGGA TTTGCGGCTA CTCCAGAGCT AGAGCTAGAC AAAGTTCTAA AAGCTGTTGA AAAAGCTGTA AAACTTGCTA AAGCCGCCGG CAGAGTTAGA AAAACGCCTG TGACTTTGAG CGAGGAGAAA CTAGCAAAAA TCAACTACAG CCTACCTGAG CTAGATCTAG ACCCTCTAGA CCTCGTAAAA ACTCTTGATA GCCACACAGC GCCGGGATTG TCGGTGAGAA GATTCTATAC CTCTGTTTGG ATAACTGAAA AACATATTTT AACAAGTGAT GGGGCGGATG TATACAGCAG GGTGCCCAGG GTGTATCTCT TCGGCATGTT TATAGCCCAT GAGCCCTCTC TAGGTAGTCT CCAGAGGGAT ATATTCCTCG GCGGGACCTC CCCCGACTCC CTTAGAAACG CTGAAAAGAT AGTAGAAGAA GAGTCAAAGA AGACTCTAGT CCTTCTAGAG AAGGCCAGAT CTGTTTCGCC GGGGAGATAC GACATTGTTT TTGGCCCCGA GATGACTGGC ATATTAGTAC ATGAATCAGT GGGGCACCCC TTTGAGTTAG ATAGAATCTA CGGCCGCGAG GGCGCCGAGG CCGGCGAGTC ATATATAAAA CCAAACAATC TAAAAGTTAG AATAGGTAGC GAGTTTGTTA ATATCACAGA CTACCCAGCT GTGCCAGGTA CATACGGCTT TTATCTTGTC GACGATGAGG GGGTTGTAGC AAGACCGAAG AAACTTGTCA GCAACGGGTG GGCCACGGAG TTTATTACAA ATAGACAATA TGCAGCGGCG ATCGGCGCCC ATAGCAACGC GGGAGCTAGA GCCTCGGCAT TTGACAGAGA GCCTATCCCC AGGATGTCTA ACACATATCT AGAGCCAGGC GATTGGCGCC CCGATGAAAT AATTAGAGAC ACACGCCGCG GGATTTATGT AGTGTCTTAC ACAGAGTGGA ATATCAACGA CACTAGATAC TCTGGGAGGT ACGGAATTTT TGAGGGATAT TTAATCGAGG GGGGCGAGCT TAAACAGCCA GTGAAGGGCT TTATAGAGGT GGACACGCCA GAGCTTTGGG GCGGCGTAGA CGCCGTCGGC AGAGACTTCC AACTGTTTAT AGGTACATGT GGCAAAGGCA ACCCACCCCA AGGCGTGCCA GTTACAATGG GAGGCCCCAC GTTTAGAAGT AGGGGGCTTA GGGTAGTGGT ATGA
|
Protein sequence | MELLVKALDY GRSLGATYVE VRWQKDYGSV AAVRNGQFEF LATFSSEGIA IRAIAEGGLG FAATPELELD KVLKAVEKAV KLAKAAGRVR KTPVTLSEEK LAKINYSLPE LDLDPLDLVK TLDSHTAPGL SVRRFYTSVW ITEKHILTSD GADVYSRVPR VYLFGMFIAH EPSLGSLQRD IFLGGTSPDS LRNAEKIVEE ESKKTLVLLE KARSVSPGRY DIVFGPEMTG ILVHESVGHP FELDRIYGRE GAEAGESYIK PNNLKVRIGS EFVNITDYPA VPGTYGFYLV DDEGVVARPK KLVSNGWATE FITNRQYAAA IGAHSNAGAR ASAFDREPIP RMSNTYLEPG DWRPDEIIRD TRRGIYVVSY TEWNINDTRY SGRYGIFEGY LIEGGELKQP VKGFIEVDTP ELWGGVDAVG RDFQLFIGTC GKGNPPQGVP VTMGGPTFRS RGLRVVV
|
| |