| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pisl_0287 |
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| Symbol | |
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| ID | 4617078 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum islandicum DSM 4184 |
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| Kingdom | Archaea |
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| Replicon accession | NC_008701 |
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| Strand | + |
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| Start bp | 286138 |
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| End bp | 286908 |
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| Gene Length | 771 bp |
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| Protein Length | 256 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 639783366 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_929809 |
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| Protein GI | 119871802 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1177] ABC-type spermidine/putrescine transport system, permease component II |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.183467 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 81 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGATAC TCCGGATATA CACTTGGGCT TTAATCGCCA TGTTGTACAT CCCGGTGGCT
CTTATAGTGG CGTTGTCTTT TAACGATAGT AAACTGCCGT ATATATGGGG TGGGTTTACA
TACAAGTGGT ATTTGGCGCT TTTCCAGTGG GAGCAAGCGT GGCAAGCATT ATTTAACAGT
TTTGTCATAG CTCTAGCTGT CTCTCTCGTG GCGACTTTAC TCGGGGTATT TATGGCATAT
GTTCTTAGAA GTGATAAATA TCTCGCAATT TCCCAAGGCG CTGTAGTTAT GCCTGAGATT
TCTGAAGCCT TGGCTTTTGC AGCGGCTCTA TGGCTTGTGA AGACTTACGT CGGCGTAGAT
CTTTTCGGAC CTGTCGGCGT TTTTCTAGCA CACCTAGCTT ATACGCTGCC CATGGCCCAC
GTCTTATTAA CGCCTTACAT AGCCTATGTT GGAAAAAGCG TTGTTGAAGC ATCGAGAATA
TTAGGCGCCT CTGAGATGAA GACTGTGGCG TTTGTAATCC TACCTATATT AATGCCGGCG
TTTATTGCGA CATTTCTTAT AGTTTTTGTA AATTCATTTG ATACATATAT AAAAACGGCG
TTTACCACAA GCCCAGGTTT TATAACAGCG CCTATACTTC TGTGGAACTA CGCAGCTAGG
GGGAGGGGCG ATCCGACTAT TTACGCCCTA GCTACTCTCA TGCTTGTCCC CTCTATTGCC
GCCGCTGTTA TATACTTTAG AGCTATAAAA CGCTATAGCT TGTCCCCCTA A
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| Protein sequence | MKILRIYTWA LIAMLYIPVA LIVALSFNDS KLPYIWGGFT YKWYLALFQW EQAWQALFNS
FVIALAVSLV ATLLGVFMAY VLRSDKYLAI SQGAVVMPEI SEALAFAAAL WLVKTYVGVD
LFGPVGVFLA HLAYTLPMAH VLLTPYIAYV GKSVVEASRI LGASEMKTVA FVILPILMPA
FIATFLIVFV NSFDTYIKTA FTTSPGFITA PILLWNYAAR GRGDPTIYAL ATLMLVPSIA
AAVIYFRAIK RYSLSP
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