Gene Pisl_0204 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPisl_0204 
Symbol 
ID4616531 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum islandicum DSM 4184 
KingdomArchaea 
Replicon accessionNC_008701 
Strand
Start bp193635 
End bp194207 
Gene Length573 bp 
Protein Length190 aa 
Translation table11 
GC content53% 
IMG OID639783286 
Productbeta-lactamase fold-like Zn-dependent hydrolase 
Protein accessionYP_929729 
Protein GI119871722 
COG category[R] General function prediction only 
COG ID[COG2220] Predicted Zn-dependent hydrolases of the beta-lactamase fold 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000768603 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value0.146366 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGAGAC TAGTCTTTAG AGACGTGAGA ATCGTGCGGT GGGACTACGC TGGGGTTGAG 
ATATCGGCAG GCGGGGAGTC ACTCTGTATA GACGTGTTGA AGCCGCCCTG TAGACATGTC
CTCTACACCC ACATCCACCC GAGACACTAC GGCGGCGTCG GGGGCTTGGC ACCTCCTGCG
GTAAAGCCCG GAGATAGGCT TGAGCTCGGG CCCTTTGCCG TATCTGTTGT GGAGGCTTAT
AACATGACTA AATTAATAAA TGGAGCTCCA GTACATCCAA AGGGGTTCGG CGTCGGCTAT
CTGGTAGAGG TGGGCGGCGT ATCCCTATAC CACCCGGGAG ATACTGATTT AATAGGGGAG
ATGGCAAAAA TTAAGACAGA CATCTTTCTA GCCCCCATCG GGGGGGATGG CACTATGACA
GCAGAAGAAG CCGCCGAGGC TGTTAAACTC ATCCGTCCAA AGATCGCAAT ACCCATCCAC
TTCGGGGAGA TGCGGCCCTA CGTTAAGTTT AGAGACATTT CCCAGCCCTA TACCCAAGTG
GTGTACCTAG ATGCCTCCCC CTCAAATATA TAA
 
Protein sequence
MLRLVFRDVR IVRWDYAGVE ISAGGESLCI DVLKPPCRHV LYTHIHPRHY GGVGGLAPPA 
VKPGDRLELG PFAVSVVEAY NMTKLINGAP VHPKGFGVGY LVEVGGVSLY HPGDTDLIGE
MAKIKTDIFL APIGGDGTMT AEEAAEAVKL IRPKIAIPIH FGEMRPYVKF RDISQPYTQV
VYLDASPSNI