Gene Pisl_0196 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPisl_0196 
Symbol 
ID4617055 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum islandicum DSM 4184 
KingdomArchaea 
Replicon accessionNC_008701 
Strand
Start bp185538 
End bp186053 
Gene Length516 bp 
Protein Length171 aa 
Translation table11 
GC content47% 
IMG OID639783278 
Producthydrogenase maturation protease 
Protein accessionYP_929721 
Protein GI119871714 
COG category[C] Energy production and conversion 
COG ID[COG0680] Ni,Fe-hydrogenase maturation factor 
TIGRFAM ID[TIGR00072] hydrogenase maturation protease 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value0.0455702 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTACTAG TCGTCGGGCT GGGCAACGTA GTCTACGGAG ACGACGGTTT TGGTAGTTGT 
CTAGCTCAAG TCCTCTCACA TTACAACGAT TTTGTTTTTG ATGGAAATGC CCACGGCATA
GGCGTTTTAG GAACCTTAGC GGATTACGAC ATCTTAGTTT TTCTAGACAT AGACGTTAGA
TTGCCCCCTG GTGCTGTAGC TATAGAGAGA GTCGAGGGCT CTCTTACTCT CCAAGAGACT
AGGCTTATAG ATGCCCACAG GACGCCGCCT TCTTTACTTG TCGGTTATCT CAGGGCGATG
GGGCGAGATC CCAAGGCCTA TATAATCGCG GTGGGGCCTA AGACACTCGA GCCGTTTTCT
CCGCCGTCGC AAGAGGTTAT AAAGGCTGTA CCTATTGCAG TAGAGGAGTT AAAAAAATTG
CTTGCTCAAT TTGGCGTCGA ACTTAAAATT GGAGAGAATG TGGTAGAAGA GTTTAAAAAC
TGCTACCGCA GAGCATTGAG GTATGAGCGA GTTTAA
 
Protein sequence
MLLVVGLGNV VYGDDGFGSC LAQVLSHYND FVFDGNAHGI GVLGTLADYD ILVFLDIDVR 
LPPGAVAIER VEGSLTLQET RLIDAHRTPP SLLVGYLRAM GRDPKAYIIA VGPKTLEPFS
PPSQEVIKAV PIAVEELKKL LAQFGVELKI GENVVEEFKN CYRRALRYER V