Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pisl_0192 |
Symbol | |
ID | 4617024 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pyrobaculum islandicum DSM 4184 |
Kingdom | Archaea |
Replicon accession | NC_008701 |
Strand | - |
Start bp | 184149 |
End bp | 184559 |
Gene Length | 411 bp |
Protein Length | 136 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 639783274 |
Product | hydrogenase expression/synthesis, HypA |
Protein accession | YP_929717 |
Protein GI | 119871710 |
COG category | [R] General function prediction only |
COG ID | [COG0375] Zn finger protein HypA/HybF (possibly regulating hydrogenase expression) |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 46 |
Fosmid unclonability p-value | 0.342154 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCACGAAT GGTCACTTGC GCTTTCTGTA ATTCAAACTG TAGATAAATG GGCGAGAGAA CACAATGTAG AGGTTAGAAA GATCTCTCTT TCTGTGCCCA TAGTGTCACA ACTAGACATC TCCATATTGA GAGAGGCTTT TGACATGCTT AAGAAAGAGT CTAGACTTGA AAAAGCAGAG CTGGAGGTAA AAGTTAGGAC TCCCAGATAT AGATGTAGGG CATGTGGCTA TATGTTTGGT CATGAGGAGG TGGCCTCTCA GATAGAGGCT TTAGTTGGGA AATATGGCGA GGAGTACCCC CTACATCTCG TGCCCGAGTT GCTCCCCGCG TTTGTAAAAT GCCCAAAATG CGGCTCGCAT GATATTGAGG CAGACCTCTC AATACAAGTA GAACAGATTG AGACGGTATG A
|
Protein sequence | MHEWSLALSV IQTVDKWARE HNVEVRKISL SVPIVSQLDI SILREAFDML KKESRLEKAE LEVKVRTPRY RCRACGYMFG HEEVASQIEA LVGKYGEEYP LHLVPELLPA FVKCPKCGSH DIEADLSIQV EQIETV
|
| |