Gene Pisl_0192 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPisl_0192 
Symbol 
ID4617024 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum islandicum DSM 4184 
KingdomArchaea 
Replicon accessionNC_008701 
Strand
Start bp184149 
End bp184559 
Gene Length411 bp 
Protein Length136 aa 
Translation table11 
GC content45% 
IMG OID639783274 
Producthydrogenase expression/synthesis, HypA 
Protein accessionYP_929717 
Protein GI119871710 
COG category[R] General function prediction only 
COG ID[COG0375] Zn finger protein HypA/HybF (possibly regulating hydrogenase expression) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value0.342154 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACGAAT GGTCACTTGC GCTTTCTGTA ATTCAAACTG TAGATAAATG GGCGAGAGAA 
CACAATGTAG AGGTTAGAAA GATCTCTCTT TCTGTGCCCA TAGTGTCACA ACTAGACATC
TCCATATTGA GAGAGGCTTT TGACATGCTT AAGAAAGAGT CTAGACTTGA AAAAGCAGAG
CTGGAGGTAA AAGTTAGGAC TCCCAGATAT AGATGTAGGG CATGTGGCTA TATGTTTGGT
CATGAGGAGG TGGCCTCTCA GATAGAGGCT TTAGTTGGGA AATATGGCGA GGAGTACCCC
CTACATCTCG TGCCCGAGTT GCTCCCCGCG TTTGTAAAAT GCCCAAAATG CGGCTCGCAT
GATATTGAGG CAGACCTCTC AATACAAGTA GAACAGATTG AGACGGTATG A
 
Protein sequence
MHEWSLALSV IQTVDKWARE HNVEVRKISL SVPIVSQLDI SILREAFDML KKESRLEKAE 
LEVKVRTPRY RCRACGYMFG HEEVASQIEA LVGKYGEEYP LHLVPELLPA FVKCPKCGSH
DIEADLSIQV EQIETV