Gene Pisl_0179 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPisl_0179 
Symbol 
ID4617381 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum islandicum DSM 4184 
KingdomArchaea 
Replicon accessionNC_008701 
Strand
Start bp172608 
End bp173276 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content49% 
IMG OID639783261 
Producturoporphyrin-III C/tetrapyrrole methyltransferase 
Protein accessionYP_929704 
Protein GI119871697 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0007] Uroporphyrinogen-III methylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.631279 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones52 
Fosmid unclonability p-value0.975084 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGCTCT ACGTAGTGGG GGCAGGCCCT GGCGACCCTA AGTTATTGAC TATTAGAGCT 
AGAGAGCTAC TTGAGGAAGC CGACGTGGTG GCATATGGCG ACCTCGTGCC AGAGGAGGTG
GTGAAAATCG CCAAGAAGGC GCGTGTTGTA AAAATTGGCC ATAGGAGAGT GGAACACGAC
GCCGCTATAG AAGCTCTAAT TGAAGAAGCG CGGTGGAGAA ACGTAGTGAT TTTAAAAAAC
GGCGATCCCA CAATATTTGG GAGGGGGGTC AAGGTGTGTA AAATGGCAAG AGAGAGGGGG
GTGCCCTGCG AAATTGTGCC TGGCGTCAGC TCTTTTACAG CCGCGGCCGC CCTCTTCCAG
ATAGAGCTTA CAGACGGCGA AAATCTTAGA CATATAGCTC TGTTGTCATA TCCACATTTC
TCAGCTGACA TACTTAGAGA AATAAAGGCA GACACTCTGG TTATATTTAT GATGGGAGAT
AAACTACAAG AGGTGAGCCA GGTGTTAGCT CAGGTCTGTA ACCCAGAGAG AGTATACCTC
TGCGTCGGAG TGTCCCTAGG CGGCTATTGC GAAGAAGTCT CCCCTGAGGT TTTAGGAGAA
AAGAAAGGCC TACGACCAAC TCTTGTCATA GTACAGAGAT GTACATCTTC AAAGAGTATA
AAAATGTAA
 
Protein sequence
MPLYVVGAGP GDPKLLTIRA RELLEEADVV AYGDLVPEEV VKIAKKARVV KIGHRRVEHD 
AAIEALIEEA RWRNVVILKN GDPTIFGRGV KVCKMARERG VPCEIVPGVS SFTAAAALFQ
IELTDGENLR HIALLSYPHF SADILREIKA DTLVIFMMGD KLQEVSQVLA QVCNPERVYL
CVGVSLGGYC EEVSPEVLGE KKGLRPTLVI VQRCTSSKSI KM