Gene Pisl_0160 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPisl_0160 
Symbol 
ID4616745 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum islandicum DSM 4184 
KingdomArchaea 
Replicon accessionNC_008701 
Strand
Start bp152357 
End bp153133 
Gene Length777 bp 
Protein Length258 aa 
Translation table11 
GC content52% 
IMG OID639783242 
Productformate dehydrogenase, cytochrome b556 subunit (formate dehydrogenase gamma subunit) 
Protein accessionYP_929685 
Protein GI119871678 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones72 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGCGTCGG GCGAGGGTAG AAGAGAAAAA ATAATAGAAA AGTTTTTAAA CTTCTACTTA 
GTTTTATACA TGGATAGAGT GGAGGTTGTA AGTATTGGGT ATAGGGTTGC CCACCAGTGG
AATTTGTTGT TGTTTACTGT GTTGGCGATT ACTGGCGGCG CTCTATTTGC CATAGAGGTT
TTGGCCCCCC TGGTGTACGC GGTGGGCGCC CCTCTGGCGG CGGCGGTGGG CACAGACGCC
GTTACAGCCG GCGTGCAGTT GTTTAGAATT GCCCACAGAT TTCTAGGGCA TATATGGGGG
GCGTTGCTCT TGGTGTACGC CGTCAATCTA CTCCTCTTTA AGAAGGTGAG GATTTTTGAC
GCCTTCCGCA AGCCGCTTGG CCAACAGATT AGGGAAGCTA AGGCGTTGGC TGGGCACTAC
CTCTTCGGCA AGCCGCTTCC CGAGGACGTC AAGGCGTCTA TGGAGAGACA CAACGTGTTT
GTTGCCTACA TGGCGCTTGT GCTTATCGCG TCGGTAGTAC TCCTCTCTAT TAGCGGCGTG
GCGCTTGTCT ATAGAGACGC CCTAGGCCTA TCTCTAGCGG AGGCGAGACT TATGCTGTTG
CTACACGACG TCGGCTTCGC CCTAGGGCTA CTCTTCGTAG CGCTTCACAT ATTCGCCGTA
CTACACCCCA CAAACAGACC ACTACTCAAC GCCATGTTCA GCGACGGAAC CATCCCACTA
GACTGGGCAA AAACACACAT GCCAAACTAC TTAAGAAGAC GTGGAATCGC TGTGTAA
 
Protein sequence
MASGEGRREK IIEKFLNFYL VLYMDRVEVV SIGYRVAHQW NLLLFTVLAI TGGALFAIEV 
LAPLVYAVGA PLAAAVGTDA VTAGVQLFRI AHRFLGHIWG ALLLVYAVNL LLFKKVRIFD
AFRKPLGQQI REAKALAGHY LFGKPLPEDV KASMERHNVF VAYMALVLIA SVVLLSISGV
ALVYRDALGL SLAEARLMLL LHDVGFALGL LFVALHIFAV LHPTNRPLLN AMFSDGTIPL
DWAKTHMPNY LRRRGIAV