Gene Pisl_0115 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPisl_0115 
Symbol 
ID4617558 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum islandicum DSM 4184 
KingdomArchaea 
Replicon accessionNC_008701 
Strand
Start bp109288 
End bp110022 
Gene Length735 bp 
Protein Length244 aa 
Translation table11 
GC content54% 
IMG OID639783197 
Producturoporphyrin-III C-methyltransferase 
Protein accessionYP_929641 
Protein GI119871634 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0007] Uroporphyrinogen-III methylase 
TIGRFAM ID[TIGR01469] uroporphyrin-III C-methyltransferase 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones66 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGGGAGGG TCTACGTCGT GGGGGCGGGG CCAGGCGACC CCGAGCTCAT CACGGTCAAG 
GGCCTCAGGC TATTGGAAAA TGCAGACGTC GTACTCCACG ATAGACTTGT GGCGCCTGAG
TTATTAAAAC GCGTAAAGCC CGGGGCCGTA GTGATTGACG TGGGCAAGAG ACCAGGCGGC
GCCGGCCCCA CGCAAGCGGA GATAAACGAG ATACTCTTCA AATATGCACA GCTATATAAC
ACTGTGGTGA GACTCCACGG GGGGGATCCC TTGGTGTTTG GAAGGGGGTT TGAAGAGTGT
GAATACCTTG TGGCAAGGGG GGTTCCCTGT GAGTTTGTCC CCGGGGTTAC CAGCGGTTTT
GCTGCTCCCG CACGTTATTA CATACCTCCG GTAGTTAGAG GCACTGCGAG CTCTGTTGCG
TTAGTCACAG GGAGAGAAGA CCCCTCAAAG GGCTTGCGTC AAGTAAATTT CAGACGATTA
GCCAACGCCG TAGACACTAT AGTCATATAT ATGGGCGCCT CTTCTGCTGG CGAAATAGCT
ATAGAGCTCA TAGAGGGCGG CTTGTCTGGA GAAACTCCCG TCGCCGTGAT AAAATCCGCA
TATTTTAAAG ATGAAGAGTT CTATACTACT ACACTAAGCC GTCTCGGCCC TGTGCCAAAT
CCAAGTATAA TAGTCGTGGG AAGGGTCGTA GAGAGGGGGG CTAGGCTATG GGAGGCGGCA
CGGAGATTGT TGTAG
 
Protein sequence
MGRVYVVGAG PGDPELITVK GLRLLENADV VLHDRLVAPE LLKRVKPGAV VIDVGKRPGG 
AGPTQAEINE ILFKYAQLYN TVVRLHGGDP LVFGRGFEEC EYLVARGVPC EFVPGVTSGF
AAPARYYIPP VVRGTASSVA LVTGREDPSK GLRQVNFRRL ANAVDTIVIY MGASSAGEIA
IELIEGGLSG ETPVAVIKSA YFKDEEFYTT TLSRLGPVPN PSIIVVGRVV ERGARLWEAA
RRLL