Gene Ping_3660 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_3660 
Symbol 
ID4624078 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp4473177 
End bp4474097 
Gene Length921 bp 
Protein Length306 aa 
Translation table11 
GC content36% 
IMG OID639798776 
Producttranscriptional regulator, substrate-binding of LysR family protein 
Protein accessionYP_944942 
Protein GI119947262 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCAATG AAAATATTAC TTTAAAAAAA TTACACATTT TTTTAACTTT TATGAAATGC 
CGCACAATGA ATAAAACAGC TGAGATGTTA AATATGAGTA CTGTCAGCAT ACACAGAGCC
ATTCATTCTT TAGAAACAGA ATTACAATGC CCCTTATTCC AACAACAAGG ACGACTTTTG
TCCCCGTTAG ACAGTGCAAA AACATTAGAG ATAGAAGCAA AAATATTATT AAAGCAATTA
GGGAGGACTA TTTCAGAGAC ACAAGAAACA GCTGGTATTT TTTCTGCTCA TTTTAAGCTT
GGATCTATCT ATTCATTAAC TTTTAATTCC ATCCCTGCAT TGATAACCAG CATGAAAAAA
CAGGATAAGA AACTTGAAAT TGAGTTAACG ACCTCCTCTA ATAAATATTT ATTCAAGAAA
TTAACGGCCT TGGAGTTAGA TGTCATTGTT GTCTCTTTAG ACGCGCCACT GCTTGATCCA
TCATTAATTT TCTTTCCTTT ATTTGAGGAC CACTTAGCGC TTGCCGTTCC GGTGAATGAC
CCCCTTGCGT CTTATTCCAG CATTGCCTTG GCGGATATAA AAAATTGCCC TTTTGTGATG
CTCAGTAAAG GTTTTGCCAC CGCTCAAGAT GTCTTAAGAA CCTTTGAAAA AGCACAGATA
AAGCCCAATG TGGTAATGGA AGTCAATGAT ATTTTCAGCC TTATTAGCAT GGTCAGCACC
GGTCTTGGTT ACAGTCTGTT ACCAAACAGA ATTGCGCGTA TTTTAAATGA CAAAGTTAAA
TTAATCCCAC TACATGAGCA GGACAAAATA AAACAAACTA TTACTATGGT TTGCCTTGCC
AGTCGCTCAA AAGAACCAAA AATATTAGCT TTTACAAAGC AGTGCCATCT TTATGCAAAA
TCATTAAGAG ATGCTAAATG A
 
Protein sequence
MLNENITLKK LHIFLTFMKC RTMNKTAEML NMSTVSIHRA IHSLETELQC PLFQQQGRLL 
SPLDSAKTLE IEAKILLKQL GRTISETQET AGIFSAHFKL GSIYSLTFNS IPALITSMKK
QDKKLEIELT TSSNKYLFKK LTALELDVIV VSLDAPLLDP SLIFFPLFED HLALAVPVND
PLASYSSIAL ADIKNCPFVM LSKGFATAQD VLRTFEKAQI KPNVVMEVND IFSLISMVST
GLGYSLLPNR IARILNDKVK LIPLHEQDKI KQTITMVCLA SRSKEPKILA FTKQCHLYAK
SLRDAK