Gene Ping_3574 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_3574 
Symbol 
ID4625160 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp4391738 
End bp4392469 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content46% 
IMG OID639798690 
Productflagellar basal-body rod protein FlgF 
Protein accessionYP_944856 
Protein GI119947176 
COG category[N] Cell motility 
COG ID[COG4787] Flagellar basal body rod protein 
TIGRFAM ID[TIGR03506] fagellar hook-basal body proteins 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCCTA TTTTATTCAC CGCCGCCACG AGTGCCAGTA AACTAATGAT CTCGCAGCAT 
GTGAGAGCCA ATAATATGGC CCAAGTAAAT ACCATTGGTT TTAAGGCCGT GCTGGAAAGA
ACCGTTCCGG TATTCCGCAC CGGGGATGGT TTTCTCAGCA GTGTTACCAG CCGAAGTAAC
TCTACTTCAA TTGACTTCAG CCATGGCAAG CTCTCACAAA CCGGACGGCC CTTAGATGTT
GCTATTACCG GAGATGGTTT TTTTGCTGTT CGAGGCAATG ATGGTAAAGA AAGCTATACC
CGTGCGGGTA ATATCAAAGC GTCAGCGGAT GGGGAATTAA GTGTTAATAA TAATGCTTTA
TTGGGCACCG GAGGGGAGCA ACTGGTATTA CCTGAGCATC AAAGTCTGAC TATCAGTAAT
AAGGGTATTA TCACTGTGAT GTCTAATGGT GGAGGTGCGA GCATTGAGGT CGGCCAGATT
AAACTGGTTA ATCCGGATAC CAATAAACTG ACGTTAAACA CCTCCGGGAC ATTTAGCAGC
GCGGTGCCAC TTGAGGCTTC TCCTGATGTA GAAATGACTT CGGAGTATCT GGAAAGCGCC
AATGTATCGG TCATTTCAGA AATGATTGGG GTGATGACAG CCACTCGTCA GTATGAAATG
CAGGTCAAAA TGATGAAAGC GGCAGATCAA CTGATAGCCG CAGGTAATAA ACTAATCTCG
GCGAGGGGAT AA
 
Protein sequence
MNPILFTAAT SASKLMISQH VRANNMAQVN TIGFKAVLER TVPVFRTGDG FLSSVTSRSN 
STSIDFSHGK LSQTGRPLDV AITGDGFFAV RGNDGKESYT RAGNIKASAD GELSVNNNAL
LGTGGEQLVL PEHQSLTISN KGIITVMSNG GGASIEVGQI KLVNPDTNKL TLNTSGTFSS
AVPLEASPDV EMTSEYLESA NVSVISEMIG VMTATRQYEM QVKMMKAADQ LIAAGNKLIS
ARG