Gene Ping_3563 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_3563 
Symbol 
ID4625187 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp4381485 
End bp4382162 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content42% 
IMG OID639798679 
Productflagellar assembly protein FliH 
Protein accessionYP_944845 
Protein GI119947165 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1317] Flagellar biosynthesis/type III secretory pathway protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCGATA TAATCCGCAA GGCAGACTCA AGAGCATTTA TTGCTTATGT CTTCCCCTCT 
TTGAAGAGTG CAGCCTTTAA AGCTAACTCG GATTTGACCG CAGCATCGAC GGTTAGCGCG
GTGTATTCGC AGGAGATGAT CGATAAAGTT TTTAAAGATG CCTTTGAAAA TGGTCAACAG
GCAGGTTATG AAACAGGCTT TGAACAAGGC AAAAAAGAAG GTTACGGTAC GGGATTATTA
CAAGGCGTGA AAGAGGGCAC AGAAGAAAGT AAAAAAGAAA TAGATCTTAC TTTATCTGCC
CTGAATAGCG CAGTGATTGA GTCGCAAACT ATTACCGCCA CCCTGAAAGA GGATGTTAAG
CGGGCATCGA TCAGCATGAT CACTGAAATA ACACAAAAAG TGATTAATAA AGAGCTGGCA
CTTAATCCGG AGATTATTGT GCAGTGGATT GAGGACAGTA TCGCCTCTTT ACCAGAGCAG
CCAACTACCG TGTTGATTTC ATTAAACGAG CAGGATTACC AGCGTATTAC TAGTTTAGGA
CCGCTGCCGG ATGCGAACTG GAAACTAAAA TCTAATATTC TAATTAAGCC TGGCTGCTGC
GAAGTTAATA CCAACCTGGT TGATATTAAA ATGAATGCGC AGGAAAAAAT GCAGACCATG
ATAGAGCAGA TTAGCTGA
 
Protein sequence
MGDIIRKADS RAFIAYVFPS LKSAAFKANS DLTAASTVSA VYSQEMIDKV FKDAFENGQQ 
AGYETGFEQG KKEGYGTGLL QGVKEGTEES KKEIDLTLSA LNSAVIESQT ITATLKEDVK
RASISMITEI TQKVINKELA LNPEIIVQWI EDSIASLPEQ PTTVLISLNE QDYQRITSLG
PLPDANWKLK SNILIKPGCC EVNTNLVDIK MNAQEKMQTM IEQIS