Gene Ping_3501 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_3501 
Symbol 
ID4625535 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp4331666 
End bp4332055 
Gene Length390 bp 
Protein Length129 aa 
Translation table11 
GC content47% 
IMG OID639798617 
Product30S ribosomal protein S11 
Protein accessionYP_944783 
Protein GI119947103 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0100] Ribosomal protein S11 
TIGRFAM ID[TIGR03632] 30S ribosomal protein S11 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000656378 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000000781676 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCTAAAA CTCCAACTCG TGCTCGCAAG CGCGTTAAAA AGCAAGTTGC TGATGGTATG 
GCTCATATCC ATGCTTCTTT CAACAACACA ATCGTAACTA TTACAGACCG TCAAGGTAAT
GCGCTTTCTT GGGCAACTGC CGGTGGTTCT GGTTTCCGTG GTTCTCGTAA ATCTACTCCG
TTCGCTGCAC AGATTGCTGC TGAACGTGCT GCTGAAGCGG CTAAAGAGTA TGGTCTTAAA
AACGTAGAAG TTTTTGTAAA TGGACCCGGA CCTGGTCGTG AATCTTCGAT TCGCGCACTA
AATGCGGCGG GCTTCCGTGT AACTAACATT ACTGATGTTA CACCGATCCC ACACAATGGT
TGTCGTCCGC CTAAAAAACG CCGCGTATAA
 
Protein sequence
MAKTPTRARK RVKKQVADGM AHIHASFNNT IVTITDRQGN ALSWATAGGS GFRGSRKSTP 
FAAQIAAERA AEAAKEYGLK NVEVFVNGPG PGRESSIRAL NAAGFRVTNI TDVTPIPHNG
CRPPKKRRV