Gene Ping_3484 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_3484 
Symbol 
ID4625557 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp4310715 
End bp4312133 
Gene Length1419 bp 
Protein Length472 aa 
Translation table11 
GC content44% 
IMG OID639798600 
Productglutamine synthetase, type I 
Protein accessionYP_944766 
Protein GI119947086 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0174] Glutamine synthetase 
TIGRFAM ID[TIGR00653] glutamine synthetase, type I 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.068778 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.31098 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTACAA AAACAGTACA AGATGTTCTT GATTTTATTA AAGAGCAAGA GGTAAAATTC 
GTAGATTTAC GCTTTACCGA TACACACGGT AAAGAGCAAC ACGTCTCTAT TCCGCATCAC
CAAGCAAACG AAGACTTTTT CGAAGACGGT AAAATGTTTG ATGGCTCTTC AATTGCAGGA
TGGAAAGGCA TTCAAGATTC GGACATGGTA TTAATGCCGG ATCCAACCAC TGCTGTTCTT
GACCCCTTTA CGGATGATGC AACGCTTAAC CTGCGTTGTG ATGTGTTAGA GCCTAAAACA
ATGCTTGGTT ACGATCGTGA CCCGCGATCT GTTGCTAAAC GCGCCGAAGC ATACCTGCGT
TCAACGGGCA TTGCTGACAC TATTTTATTT GGTCCAGAGC CCGAGTTTTT CCTATTTGAC
GATGTTAAAT ACGGTAATAC TATGCAAGGT GCATTCTTTT CCATTGATGC TAAAGAAGCG
GCGTGGAACT CAGGTACCTC CTATGAAGAA GGCAATACAG GCCACCGTCC TGGTATCAAA
GGTGGTTATT TCCCTGTCGC CCCCGTAGAT TCCGCACAAA ACATCCGTAG TGCTATGTGT
CTTATCATGG AAGAGATGGG CCTTATTGTT GAAGCACATC ATCATGAAGT CGCAACTGCC
GGCCAAAATG AAATCGCTTG TCGTTTTAAT ACTATGGTTA AAAAAGCCGA TGAACTACAA
ATTTACAAAT ACGTAGTACA TAACGTTGCT CATGCCTACG GTCAAACCGC AACCTTCATG
CCTAAACCGC TTGTTGGTGA TAACGGCTCA GGTAATCACT GTCACCAGTC CCTAGGCAAA
GACGGTGTTA ACCTGTTCTC CGGCGACCAG TACGGCGGGC TTTCTCAGCT AGCGCTTTAT
TATATTGGTG GCCTTATCAA ACATGCTAAA GCACTTAATG CCTTTACTAA CGCGTCAACT
AACTCATATA AACGTCTAGT GCCACATTTT GAAGCACCGG TTATGTTAGC GTACTCTGCC
GGTAATCGCA GCGCATCTAT CCGTATTCCA ATCGTACCGT CACCAAAAGC GGCACGTGTT
GAACTACGTT TCCCGGACCC AACGATGAAC CCTTATTTAG GTTTTTCTGC GATGCTAATG
GCGGGTCTTG ACGGTATTAA AAACAAGATC CACCCTGGCG AGCCTCTTGA TAAAGATTTA
TACGATCTGC CTAAAGAAGA AGCGGATGCA ATACCACAAG TTGCTGTTTC TTTTGAAGAA
GCACTTGCTG AACTCGATGC TGACCGTGAC TTTTTAACCG CAGGAGATGT TTTCTCGAAT
GACTCGATTG ATGCCTACAT CGCCCTTAAA ACAGCTGAAT GTGAAGCTGT TTCTCGTGCA
ACGCATCCAA AAGAGTTCGA ATTATACTAC AGCGTATAA
 
Protein sequence
MSTKTVQDVL DFIKEQEVKF VDLRFTDTHG KEQHVSIPHH QANEDFFEDG KMFDGSSIAG 
WKGIQDSDMV LMPDPTTAVL DPFTDDATLN LRCDVLEPKT MLGYDRDPRS VAKRAEAYLR
STGIADTILF GPEPEFFLFD DVKYGNTMQG AFFSIDAKEA AWNSGTSYEE GNTGHRPGIK
GGYFPVAPVD SAQNIRSAMC LIMEEMGLIV EAHHHEVATA GQNEIACRFN TMVKKADELQ
IYKYVVHNVA HAYGQTATFM PKPLVGDNGS GNHCHQSLGK DGVNLFSGDQ YGGLSQLALY
YIGGLIKHAK ALNAFTNAST NSYKRLVPHF EAPVMLAYSA GNRSASIRIP IVPSPKAARV
ELRFPDPTMN PYLGFSAMLM AGLDGIKNKI HPGEPLDKDL YDLPKEEADA IPQVAVSFEE
ALAELDADRD FLTAGDVFSN DSIDAYIALK TAECEAVSRA THPKEFELYY SV