Gene Ping_3483 details

Gene Information

• Locus tag: Ping_3483
• Symbol: bipA
• ID: 4625556
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Psychromonas ingrahamii 37
• Kingdom: Bacteria
• Replicon accession: NC_008709
• Strand: -
• Start bp: 4308488
• End bp: 4310311
• Gene Length: 1824 bp
• Protein Length: 607 aa
• Translation table: 11
• GC content: 41%
• IMG OID: 639798599
• Product: GTP-binding virulence regulator protein BipA
• Protein accession: YP_944765
• Protein GI: 119947085
• COG category: [T] Signal transduction mechanisms
• COG ID: [COG1217] Predicted membrane GTPase involved in stress response
• TIGRFAM ID: [TIGR00231] small GTP-binding protein domain; [TIGR01394] GTP-binding protein TypA/BipA

Plasmid Coverage information

• Num covering plasmid clones: 11
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 15
• Fosmid unclonability p-value: 0.325344
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGTTGTTAG AAAAATTAAG AAATATTGCC ATTATTGCTC ACGTTGACCA TGGTAAAACC 
ACCCTTGTTG ATAAATTACT AGAGCAATCT GGAACGCTAG ATTCACGCGG TGGTGCTGAA 
GAGCGCGTTA TGGACTCGAA TGATTTAGAG AAAGAACGTG GTATTACTAT CCTTGCAAAA 
AACACTGCGA TTGTGTGGAA TGATTACCAT ATCAATATCG TAGATACACC TGGACACGCC 
GATTTCGGTG GTGAAGTAGA GCGTATTTTA TCTATGGTAG ACAGTGTTTG TCTAATCGTA 
GATGCGGTTG ACGGTCCGAT GCCACAAACG CGTTTTGTAA CTCAAAAAGC ATTTGCACAC 
GGTCTTAAAC CAATAGTTGT TGTCAATAAA GTAGATAAAG CAGGCGCACG TCCTGAATGG 
GTTATCGATC AAGTATTCGA CCTGTTTGAT AATCTTGGTG CAACTGACGA ACAGTTAGAT 
TTCCAAATTG TTTATGCATC AGCGATAAAC GGTTGGGCAA GTAAAGATAT GGAAACTGAA 
AGCGATACTA TGGAACCTTT ATTCCAAACT ATTGTTGACA GTGTTGAAGC ACCGGATGCA 
GATCGTGATG GTGACTTCCA AATGCAAATC TCTCAACTTG ATCACAACTC TTATGTAGGT 
GTTATCGGAG TGGGCCGTAT TACACGCGGT AGTGTTAAAG TTAACCAGCA AGTGACAGTT 
ATTGGCGCTG ATGGTAAAAA ACGTAACGCT AAAGTGGGTC AGGTATTAGG TTATTTAGGA 
CTTGAACGTA ACGATGTGGA AGTGGCTGAA GCCGGTGATA TTGTTGCAAT CAGTGGCCTG 
GGTGAACTTA AGATTTCCGA TACTGTTTGT GCGCAAAACA ATGTTGAAGC TCTGCCTCCA 
TTAACTGTTG ATGAACCAAC GGTAACGATG ACCTTCCAGG TAAACAATTC ACCTTTCTGT 
GGTAAAGAAG GTAAATTTGT TACTTCACGT AATATTTTAG ACCGTTTACA CAAAGAGCTA 
GTACATAACG TAGCGCTTAA GGTTGAAGAA ACCGCTGATC CGGATAAATT CAAAGTATCT 
GGTCGTGGTG AACTGCATTT AGGTATTCTA ATTGAGAACA TGCGTCGTGA AGGTTACGAA 
CTTGCGGTAT CTCGCCCTGA AGTTATCGAG CGTCTTGTAG ACGGTCAATT GCAAGAACCC 
TATGAAACAT TAACCGTTGA CGTTGAAGAA CAAAGTCAAG GTTCGGTTAT GGAGCAGTTG 
GGCGTTCGTA AAGCTGAATT GACTAACATG ATGCCAGACG GAAAAGGTCG TGTACGTTTA 
GACTTTGTTA TTCCAAGCCG TGGTTTAATC GGTTTCCAAA CTGAATTCAT GACATTAACG 
TCGGGTTCTG GTTTACTTTA CCATTCATTT GATCACTACG GTCCCCATAA AGGTGGCACT 
ATTGGTCAAC GCCAAAATGG TGTTTTAATT TGTAATCAAA CAGGTAAAGC GGTTACTTAC 
TCTCTGTTCT TCTTACAAGA TCGTGGTCGT CTATTCCTAG GACATGCTAC AGAAGTATAC 
GAAGGTCAAA TCATTGGTAT TCATAACCGT GCTAACGATT TAACAGTTAA CTGTGTACGT 
GGTAAATCAT TAACTAACGT TCGTTCTTCT GGTACAGATG AAGCACAAAC ACTTTCACCT 
GAAATTATTT TAACGCTTGA ACAAGCGCTT GAGTTTATTG ATGTGGATGA ATTAGTTGAA 
GTAACACCAA AAAGCATTCG TATCCGTAAG AAACTACTTT CAGAGAACGA ACGTAAACGT 
GCATCGCGCC CTACTAAAGG CTAG 

 

Protein sequence

MLLEKLRNIA IIAHVDHGKT TLVDKLLEQS GTLDSRGGAE ERVMDSNDLE KERGITILAK 
NTAIVWNDYH INIVDTPGHA DFGGEVERIL SMVDSVCLIV DAVDGPMPQT RFVTQKAFAH 
GLKPIVVVNK VDKAGARPEW VIDQVFDLFD NLGATDEQLD FQIVYASAIN GWASKDMETE 
SDTMEPLFQT IVDSVEAPDA DRDGDFQMQI SQLDHNSYVG VIGVGRITRG SVKVNQQVTV 
IGADGKKRNA KVGQVLGYLG LERNDVEVAE AGDIVAISGL GELKISDTVC AQNNVEALPP 
LTVDEPTVTM TFQVNNSPFC GKEGKFVTSR NILDRLHKEL VHNVALKVEE TADPDKFKVS 
GRGELHLGIL IENMRREGYE LAVSRPEVIE RLVDGQLQEP YETLTVDVEE QSQGSVMEQL 
GVRKAELTNM MPDGKGRVRL DFVIPSRGLI GFQTEFMTLT SGSGLLYHSF DHYGPHKGGT 
IGQRQNGVLI CNQTGKAVTY SLFFLQDRGR LFLGHATEVY EGQIIGIHNR ANDLTVNCVR 
GKSLTNVRSS GTDEAQTLSP EIILTLEQAL EFIDVDELVE VTPKSIRIRK KLLSENERKR 
ASRPTKG