| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ping_3449 |
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| Symbol | |
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| ID | 4625603 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychromonas ingrahamii 37 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008709 |
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| Strand | - |
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| Start bp | 4265713 |
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| End bp | 4266417 |
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| Gene Length | 705 bp |
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| Protein Length | 234 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 639798566 |
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| Product | ribosomal protein L1 |
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| Protein accession | YP_944732 |
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| Protein GI | 119947052 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0081] Ribosomal protein L1 |
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| TIGRFAM ID | [TIGR01169] ribosomal protein L1, bacterial/chloroplast |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00000354008 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.00724733 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCTAAAT TATCAAAACG TATGAAACTT GTTCGCGACA GTGTTGACGC AAGTAAAGAA
TATGAAATCA ATGAAGCTGT TGTTCTTTTA CAAAAGCTAG CGACTGCTAA ATTTACCGAA
AGTATTGATG TATCAGTAAA CCTCGGTGTT GATCCTCGTC GTAGTGATCA AAATGTCCGT
GGCGCAACAG TATTGCCACA CGGTACAGGC CGTACTGTAC GTGTTGCTGT ATTTACACAG
GGTGCAAATG CAGAAGCTGC TAAAGCTGCT GGTGCCGATA TTGTGGGTAT GGACGATCTT
GCTGCACAAG TTAAAGCCGG TGAATTGAAC TTTGACGTCG TAATTGCATC TCCAGATGCA
ATGCGTGTTG TTGGTCAATT AGGTCAGATC TTAGGTCCTC GTGGACTAAT GCCTAACCCT
AAAGTTGGCA CAGTAACACC TGATGTTGCA ACAGCTGTTA AAAACGCGAA AGCGGGTCAA
ATCCGTTACC GTAATGATAA GAATGGTATT ATCCATTCTA CAATCGGTAA AGTAACGTTC
ACACCTGTAC AAATCAGAGA AAACCTTGAA GCACTATTGG CAGCTCTTAT TAAAGGCAAA
CCTTCAGGCG CTAAAGGTCA ATTCTTGAAA AGAATTAGTC TATCTACAAC GATGGGTGCC
GGTCTAAAAG TCGATACATC ATCAGTTAAA GCAACGGTAG CTTAA
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| Protein sequence | MAKLSKRMKL VRDSVDASKE YEINEAVVLL QKLATAKFTE SIDVSVNLGV DPRRSDQNVR
GATVLPHGTG RTVRVAVFTQ GANAEAAKAA GADIVGMDDL AAQVKAGELN FDVVIASPDA
MRVVGQLGQI LGPRGLMPNP KVGTVTPDVA TAVKNAKAGQ IRYRNDKNGI IHSTIGKVTF
TPVQIRENLE ALLAALIKGK PSGAKGQFLK RISLSTTMGA GLKVDTSSVK ATVA
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