Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ping_3370 |
Symbol | |
ID | 4625681 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychromonas ingrahamii 37 |
Kingdom | Bacteria |
Replicon accession | NC_008709 |
Strand | + |
Start bp | 4162792 |
End bp | 4164063 |
Gene Length | 1272 bp |
Protein Length | 423 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 639798482 |
Product | hemolysin |
Protein accession | YP_944655 |
Protein GI | 119946975 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG4536] Putative Mg2+ and Co2+ transporter CorB |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGGACGTCA TACCCACTAG TGGATTACTG ATCACCCTTG GAATTTTAAT TATTATTTCA GCTTATTTTT CTAGCTCAGA AACCAGCATG ATGTCATTAA ATCGCTATCG CTTACGGCAC CTTGCAAAGG GTAAAAACAA AGTAGCAATA CGCGTTGAAA ATTTACTTAA AGAACCGGAC AAACTTATTG GCCTGATCTT AATAGGTAAT AACTTAGTTA ATATTTTAGC GTCGGCGATT GCAACCATCA TAGGTCAACG TTTATTTGGT GATGCCGGCA TTGCTATAGC GACCGGTATA CTGACTTTAA TTATTTTGAT TTTTGCCGAA GTGACCCCAA AAACCTTAGC CGTGCTCTAC CCCGAAAAAA TCGCCTTTCC AAGTTCATTT ATTTTGCGCC CGTTACAAAA ATTGCTCAGC CCACTGGTAT GGTTAATCAA TGGTATATCC AATACCCTGT TACGAATTTT TGGTGTCAAT GTTAACCATA CGGATGATCA AGCGCTATCA AGCGATGAAT TACGCTCAGT GGTGCATGAG GCAGGCTCAA TGATTCCAGC GCATCACCAG CAGATGTTGC TGAGTATTCT GGAGCTTGAA AAAGTCACCG TTGACGAAAT AATGATCCCA CGTAATGAGA TTGCCGCAAT CAATATTAAC GATGATTGGG AGACTATTCT CAAACAATTA CAACATCGTA CTCATACAAT GACACTTTTA TACCGGGATA CCATTGATGA TGCGATAGGT TTTGTGCATG CGCGCGATTC TCTCCTGATT CTCCTTAAAG GGGATTTCAC AAAAACAAGC CTGTTACGTA GTGTGAGAGG ATTATATTTT ATTCCCGAAG GCACTGCTTT AAATACCCAA CTGATTAAAT TTCAGCATAA TAAGGAGCGT ATCGGTTTAG TGGTAGATGA ATATGGGGAT ATTCAGGGGT TAGTAACACT TGCCGACATT TTAGAAGAAA TAGTTGGTGA CTTTACGACC ACACAGGAGC CCCACAGCTC GCAGGAAATT TACAAGCAAA AAGATAATTC TTATATTATT GAAGGTAGTC TGGGTATTCG CGATATCAAT AAAGAAATGG GTTGGAAGCT GCCAACAGAT GGACCTCGTA CTTTGAATGG TCTGATTTTA GAATATCTTG AAGAAATACC TAAAGGACAT ATCAGTGCGC GTATCTGCGG TTATCCTATG GAAATCTTAG AAGTGGAAAA CAATAAGGTT AAACTGGTCA GGGTGATGCC CCAGCTTTAC AAAAAACAAT AG
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Protein sequence | MDVIPTSGLL ITLGILIIIS AYFSSSETSM MSLNRYRLRH LAKGKNKVAI RVENLLKEPD KLIGLILIGN NLVNILASAI ATIIGQRLFG DAGIAIATGI LTLIILIFAE VTPKTLAVLY PEKIAFPSSF ILRPLQKLLS PLVWLINGIS NTLLRIFGVN VNHTDDQALS SDELRSVVHE AGSMIPAHHQ QMLLSILELE KVTVDEIMIP RNEIAAININ DDWETILKQL QHRTHTMTLL YRDTIDDAIG FVHARDSLLI LLKGDFTKTS LLRSVRGLYF IPEGTALNTQ LIKFQHNKER IGLVVDEYGD IQGLVTLADI LEEIVGDFTT TQEPHSSQEI YKQKDNSYII EGSLGIRDIN KEMGWKLPTD GPRTLNGLIL EYLEEIPKGH ISARICGYPM EILEVENNKV KLVRVMPQLY KKQ
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