Gene Ping_3316 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_3316 
Symbolcls 
ID4625730 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp4091798 
End bp4093276 
Gene Length1479 bp 
Protein Length492 aa 
Translation table11 
GC content41% 
IMG OID639798426 
Productcardiolipin synthetase 
Protein accessionYP_944602 
Protein GI119946922 
COG category[I] Lipid transport and metabolism 
COG ID[COG1502] Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthases and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACACTT CTTTATTTAC AACGAACTGG TCAGATAACT CCTTGTATGT TGGACTGACC 
GCTTTTATAT ATATAACGCT GGTGATACTG ACCTCATTAA GTGTTCTTAT TAAACGCAAA
CCCATTGGCG TTTCTCTCGC ATGGTTGCTG CTTATTTACG CTTTACCTAT GGTGGGCATG
ATAAGTTATT ATATTTTTGG CCAGCTCAAT TTAGGTAAAA AGAGAAAAAA GCGCCGCCTT
GAGATGGCGG GGTTATTTAA AACCTGGCTC GCAGATGAAG TGACAGAACA TCGCTTATCT
GATCAACAAA TTTCCAGCGC TGTGACGTCG ATTAAACATT TTGTTGAATT TGGTAGCCAA
ATGCCGATGA TGGCTGGCAA TAAACTCACC TTATTATCCT CTACTGACGT TATTTTAACG
GAGCTGGCGG ATTGTATTGA GCAAGCCCGG CACAGCTGTT ATTTAATGTT TTATATCTGC
TCGGGGGGAG GGTTGGCAAA TAATATTTTA GATGCATTAA TGCGCGCCGC GCGCAGGGGG
GTGAGCTGTA AGTTATTATT TGATTCTGTT GGCAGCCATG ATTTCTTTAA CTCTACAGAA
TCGCAGAGGC TTAGAGGGGC AGGTGTTGAA GTCTGTGAAG CCTTACCTGT GGGTACTTTT
AGATTACTCT TTCAGCGTCA AGACTTACGT TTACACCGCA AATTAGTTTG TATTGATGAT
CATGTCGCTT ATACCGGCAG TATGAACTTA GTTGATCCCG CTTTCTTTAA AAAAGAGAAA
AATATCGGTC AATGGGTTGA TATGATGGTG CGCTGCGAGG GGCCTATCGT GCAGTTGATG
AAAAGTTTGT TTGTCTGGGA TTGGTATTTG GAAACTAACG TTAAATTACC TTTTCAAAAA
CTTTATGCCG ATAGTTTTGC CATCGCCGGG GATCAAAATG TGCAGCTTAT TCCATCGGGG
CCTGAGTTTG GTGAAGCGAG TATCTATCAA GTTTTATTAA TCGCTATTTA TGAGGCTAAA
TATAGTTTGG TGCTCACCAC TCCCTATTTT GTTCCCGATG AGAGTTTGCA TGAAGCATTA
AAAGTGGCCG CGCTGCGTGG TGTTGATGTC AAAGTGATTT TGCCGGCTAA AAATGATTCC
TTTATGGTTG ATTACGCATC ACGGGCCTTT TTTGAGGAGT TGTTGGTTGC GGGGGTGAAA
ATATATAAAT TCCATGGCGG TTTACTGCAC AGTAAAAGTA TTGTTATTGA TGAAAAAATT
GCTTTATTAG GAACGGTTAA TCTAGACCGC CGTAGTTTTT GGTTAAATTT TGAAATGACG
ATGTTGGTTG ATAATGATTT TTTTGCCGAC GAATTATTGC AGCTGCAAAT GCGTTATTTA
TTGTTATCAG ATCCTTTAAT ACTGGAAGAT TGGCAGAAGC GAAGTTATCA CAAGCGCCTA
TTAGAAAGTG TTATGTACCT GTTTAGTCCG CTTTTATAG
 
Protein sequence
MDTSLFTTNW SDNSLYVGLT AFIYITLVIL TSLSVLIKRK PIGVSLAWLL LIYALPMVGM 
ISYYIFGQLN LGKKRKKRRL EMAGLFKTWL ADEVTEHRLS DQQISSAVTS IKHFVEFGSQ
MPMMAGNKLT LLSSTDVILT ELADCIEQAR HSCYLMFYIC SGGGLANNIL DALMRAARRG
VSCKLLFDSV GSHDFFNSTE SQRLRGAGVE VCEALPVGTF RLLFQRQDLR LHRKLVCIDD
HVAYTGSMNL VDPAFFKKEK NIGQWVDMMV RCEGPIVQLM KSLFVWDWYL ETNVKLPFQK
LYADSFAIAG DQNVQLIPSG PEFGEASIYQ VLLIAIYEAK YSLVLTTPYF VPDESLHEAL
KVAALRGVDV KVILPAKNDS FMVDYASRAF FEELLVAGVK IYKFHGGLLH SKSIVIDEKI
ALLGTVNLDR RSFWLNFEMT MLVDNDFFAD ELLQLQMRYL LLSDPLILED WQKRSYHKRL
LESVMYLFSP LL