Gene Ping_3301 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_3301 
Symbol 
ID4625751 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp4071874 
End bp4072338 
Gene Length465 bp 
Protein Length154 aa 
Translation table11 
GC content41% 
IMG OID639798411 
ProductRNA methyltransferase 
Protein accessionYP_944587 
Protein GI119946907 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0219] Predicted rRNA methylase (SpoU class) 
TIGRFAM ID[TIGR00185] rRNA methylase, putative, group 2 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.0858286 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTGAAA TAGCACTATT TGAACCTGAA ATCCCGCAAA ATACTGGCGC CATTATCCGT 
TTATGTGCCA ATACAGGCTG TGTTTTGCAC TTAATCGAAC CTTTAGGTTT TGATTTAGAT
GAGAAAAAAG TCCGCAGAGC AGGACTCGAC TACCATGAAC TGACCCATGT TTATCGCCAT
AAAAATTACA ACGATTTTTT ACAGGCGGTA TCAGGTAAAA GAATTTTTGC TTGTACAACA
AAAACAACTA CCTTTCATAG TCAGGCAAAT TTTCAAGCGG ACGATGTATT ACTTTTTGGC
CCTGAAACAC GAGGATTACC CGGTGAAATC CTCGATGCTT TACCCCTCGA GCAAAAACTG
CGTATTCCAA TGAGAGCGGA AAGTCGCTCA ATGAACTTAT CTAATGCAGT CTCAGTATTC
GTCTACGAAG CTTGGCGCCA ACTCGATTTT GAAGGCGCAG TTTAA
 
Protein sequence
MIEIALFEPE IPQNTGAIIR LCANTGCVLH LIEPLGFDLD EKKVRRAGLD YHELTHVYRH 
KNYNDFLQAV SGKRIFACTT KTTTFHSQAN FQADDVLLFG PETRGLPGEI LDALPLEQKL
RIPMRAESRS MNLSNAVSVF VYEAWRQLDF EGAV