Gene Ping_3292 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_3292 
Symbol 
ID4625778 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp4063426 
End bp4064982 
Gene Length1557 bp 
Protein Length518 aa 
Translation table11 
GC content38% 
IMG OID639798402 
Producthypothetical protein 
Protein accessionYP_944578 
Protein GI119946898 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.315507 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGACTG AACTGAGATT TTTTATGCGT TTGTTGAGTT TCTTATTGTT AAGTATTTCC 
CTGCTTTTTA ATGCAGCTTG TGTGTCAAAG ACTTCCACTG TCTCAACTAC GCCGGAGAAA
ATGCCCGTCA TCAAGGAAAA ATTTTCAAAA ATCTTGGATA GCAATTTTCG AGGCTATTTT
AGTTTTGGTG ATGGTAAAGG TTATTTCACG GCTTGTGATT CCGAACAAGA TTTTCCAGTG
ATAGTTAATC CTGTATTAAG TCATATCTAT GAACAAATCA GTTCGGCAAA ATCCACCCCT
GTGTATATCG AATTTATTGG TGAAATAACC TTTCCAGCCA TAAATACACC ACCATCGAAT
GCACTAATGC GGATAGATAG AGTTCAGCAT ATGGCGCTGC CTAAAGCATC ATTGCAATGT
GCTAAAGCAA CTCATAATTT CTTATTTAAA GCTAAAGGTG AAAATCCCTA TTGGCGCTTA
AATCTTGATC AAGATCGGCT GCATTTTGCC ACTCAAGCCG GTAATAGGGC TTATCAGATT
CAAAATTCAA ACTTTAACAG CACACAAACA AGCTATATTA AAACTAACAA TGAACAGGGA
GAGCGGCTGA GTTTAAAAAT TCAACCCGAT CATTGTTATA ATTTAAAAAT GAAAGAATAT
TGGGGCCTTA CCGCCAATGT TGACAGTGTC TGGGGGGATT TCAGCGGCTG TGGAGAAACT
GGATGGCCAA TAGATTATCG CGACTTTGCC GGTGATTACT TAAATATAAC TCCCTTTAAA
AAAATAAATT TAACGCTCAA TTCAGATTAC AGCGTTGAAT ATCAAGAAAA TATTGGAGAA
AAAAGCATTA CTAAAACAGG CTTCTGGAAA AGTAATTCTC CAGATCGGGT TGTAGTGATG
CTAATGCAAC AAGGTCTGCA AAAGATACAG GAAGAACTGA TTTTCAACCG TTCAGGTGTC
ACACTCAGCA GTACTAAACT TAACAAAAAT AATATTATCT CCAGGCTCCC TCCGTCTGAG
AGGGTGTTCA ATAAAATGAC CAGTAAAAAA ATCAGCTTAA AAAACAGCAC AACCCAAATT
GAAAGAGAAT TCACAGTGCA GCATATTGAC CCAAATGCAG AAATTGATAA AGCACTACAA
AAAACGCTAA ATCAATACTT TAAAATTCAT GGCACCAATC CAAAAAACAC TCAATTTAGT
GCGGTGAATT ATGACCTCAA CGGAGACGGT CTGAATGATG CGATCGTTCT ACTTGATTGG
TGTGCAAAGA GTGGCTGTGA AATGCTTATT TTTGAGCGCC AAGAAGATGG TTATCGTTTT
GCAAGCCGCA TATCTCAGGT ACAAGTACCA GTCATAGTAT CTAGTAGTCA GCATTATTTA
TGGCAAAGTT TACTGGTTGA AAGAGATAGA AAATGGTTCA TACTCGATTT TGACGGCATT
AGTTACCCAC CTGATACGCG CAATCTGCCA CCGGTTAATA AACTTGATCT TGCCACTGAT
ATTATTTTAT TTAGCCAAGG TAGACCTAAA AAATGGTTCC CGATTAAAAT ACAATAA
 
Protein sequence
MMTELRFFMR LLSFLLLSIS LLFNAACVSK TSTVSTTPEK MPVIKEKFSK ILDSNFRGYF 
SFGDGKGYFT ACDSEQDFPV IVNPVLSHIY EQISSAKSTP VYIEFIGEIT FPAINTPPSN
ALMRIDRVQH MALPKASLQC AKATHNFLFK AKGENPYWRL NLDQDRLHFA TQAGNRAYQI
QNSNFNSTQT SYIKTNNEQG ERLSLKIQPD HCYNLKMKEY WGLTANVDSV WGDFSGCGET
GWPIDYRDFA GDYLNITPFK KINLTLNSDY SVEYQENIGE KSITKTGFWK SNSPDRVVVM
LMQQGLQKIQ EELIFNRSGV TLSSTKLNKN NIISRLPPSE RVFNKMTSKK ISLKNSTTQI
EREFTVQHID PNAEIDKALQ KTLNQYFKIH GTNPKNTQFS AVNYDLNGDG LNDAIVLLDW
CAKSGCEMLI FERQEDGYRF ASRISQVQVP VIVSSSQHYL WQSLLVERDR KWFILDFDGI
SYPPDTRNLP PVNKLDLATD IILFSQGRPK KWFPIKIQ