| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ping_3292 |
|---|
| Symbol | |
|---|
| ID | 4625778 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychromonas ingrahamii 37 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008709 |
|---|
| Strand | + |
|---|
| Start bp | 4063426 |
|---|
| End bp | 4064982 |
|---|
| Gene Length | 1557 bp |
|---|
| Protein Length | 518 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 639798402 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_944578 |
|---|
| Protein GI | 119946898 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.315507 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATGACTG AACTGAGATT TTTTATGCGT TTGTTGAGTT TCTTATTGTT AAGTATTTCC
CTGCTTTTTA ATGCAGCTTG TGTGTCAAAG ACTTCCACTG TCTCAACTAC GCCGGAGAAA
ATGCCCGTCA TCAAGGAAAA ATTTTCAAAA ATCTTGGATA GCAATTTTCG AGGCTATTTT
AGTTTTGGTG ATGGTAAAGG TTATTTCACG GCTTGTGATT CCGAACAAGA TTTTCCAGTG
ATAGTTAATC CTGTATTAAG TCATATCTAT GAACAAATCA GTTCGGCAAA ATCCACCCCT
GTGTATATCG AATTTATTGG TGAAATAACC TTTCCAGCCA TAAATACACC ACCATCGAAT
GCACTAATGC GGATAGATAG AGTTCAGCAT ATGGCGCTGC CTAAAGCATC ATTGCAATGT
GCTAAAGCAA CTCATAATTT CTTATTTAAA GCTAAAGGTG AAAATCCCTA TTGGCGCTTA
AATCTTGATC AAGATCGGCT GCATTTTGCC ACTCAAGCCG GTAATAGGGC TTATCAGATT
CAAAATTCAA ACTTTAACAG CACACAAACA AGCTATATTA AAACTAACAA TGAACAGGGA
GAGCGGCTGA GTTTAAAAAT TCAACCCGAT CATTGTTATA ATTTAAAAAT GAAAGAATAT
TGGGGCCTTA CCGCCAATGT TGACAGTGTC TGGGGGGATT TCAGCGGCTG TGGAGAAACT
GGATGGCCAA TAGATTATCG CGACTTTGCC GGTGATTACT TAAATATAAC TCCCTTTAAA
AAAATAAATT TAACGCTCAA TTCAGATTAC AGCGTTGAAT ATCAAGAAAA TATTGGAGAA
AAAAGCATTA CTAAAACAGG CTTCTGGAAA AGTAATTCTC CAGATCGGGT TGTAGTGATG
CTAATGCAAC AAGGTCTGCA AAAGATACAG GAAGAACTGA TTTTCAACCG TTCAGGTGTC
ACACTCAGCA GTACTAAACT TAACAAAAAT AATATTATCT CCAGGCTCCC TCCGTCTGAG
AGGGTGTTCA ATAAAATGAC CAGTAAAAAA ATCAGCTTAA AAAACAGCAC AACCCAAATT
GAAAGAGAAT TCACAGTGCA GCATATTGAC CCAAATGCAG AAATTGATAA AGCACTACAA
AAAACGCTAA ATCAATACTT TAAAATTCAT GGCACCAATC CAAAAAACAC TCAATTTAGT
GCGGTGAATT ATGACCTCAA CGGAGACGGT CTGAATGATG CGATCGTTCT ACTTGATTGG
TGTGCAAAGA GTGGCTGTGA AATGCTTATT TTTGAGCGCC AAGAAGATGG TTATCGTTTT
GCAAGCCGCA TATCTCAGGT ACAAGTACCA GTCATAGTAT CTAGTAGTCA GCATTATTTA
TGGCAAAGTT TACTGGTTGA AAGAGATAGA AAATGGTTCA TACTCGATTT TGACGGCATT
AGTTACCCAC CTGATACGCG CAATCTGCCA CCGGTTAATA AACTTGATCT TGCCACTGAT
ATTATTTTAT TTAGCCAAGG TAGACCTAAA AAATGGTTCC CGATTAAAAT ACAATAA
|
|---|
| Protein sequence | MMTELRFFMR LLSFLLLSIS LLFNAACVSK TSTVSTTPEK MPVIKEKFSK ILDSNFRGYF
SFGDGKGYFT ACDSEQDFPV IVNPVLSHIY EQISSAKSTP VYIEFIGEIT FPAINTPPSN
ALMRIDRVQH MALPKASLQC AKATHNFLFK AKGENPYWRL NLDQDRLHFA TQAGNRAYQI
QNSNFNSTQT SYIKTNNEQG ERLSLKIQPD HCYNLKMKEY WGLTANVDSV WGDFSGCGET
GWPIDYRDFA GDYLNITPFK KINLTLNSDY SVEYQENIGE KSITKTGFWK SNSPDRVVVM
LMQQGLQKIQ EELIFNRSGV TLSSTKLNKN NIISRLPPSE RVFNKMTSKK ISLKNSTTQI
EREFTVQHID PNAEIDKALQ KTLNQYFKIH GTNPKNTQFS AVNYDLNGDG LNDAIVLLDW
CAKSGCEMLI FERQEDGYRF ASRISQVQVP VIVSSSQHYL WQSLLVERDR KWFILDFDGI
SYPPDTRNLP PVNKLDLATD IILFSQGRPK KWFPIKIQ
|
|---|
| |