Gene Ping_3248 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_3248 
Symbol 
ID4626318 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp4007350 
End bp4009599 
Gene Length2250 bp 
Protein Length749 aa 
Translation table11 
GC content44% 
IMG OID639798355 
Producthypothetical protein 
Protein accessionYP_944534 
Protein GI119946854 
COG category 
COG ID 
TIGRFAM ID[TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACAAA AAGGATTTGT ACTGGTATCC GTGCTTATTA TTACGACCAT CACAACTATG 
CTGGCATTTT CGCAACTCAA AACTAATAGT CTGCAAGAAC GGATGGCCGG CAATCAACAA
AAAGAAATCA ATGCGCGGTT GGCTGCAGAA AAAGGTATTT TTAAAGGTTT TGACGATATT
AAGTCGGGAG GTACAACTGA GCAGATGCTT AGCGACTTAA ACGATTTTGC GTCTGATGAA
GATAAAGATT ACTCTTTTAG TTCACTCGAT TCTTATGGCA ATAATCTTTT TGCCTTGGTA
AGTACAGGAA AATTTGGCGG TGCCACTGCT CATTTAAAAG CAGTAATAAA AAGTCCAGAA
GGAGATGCAA TCATTGCTTG TGAGAGTGTA AATGTGTCGG GAAATGGATC CATTGAAGGC
GATGTAACTG TTATCGAAGG GAATGCTACT TTTAGCGGAA ATGGATCTAT TGCAGGGTAT
GTTACGGCTT CTGGTAGTGT AACTGGGGTA CCGGAAGATT ATTACAGCGT AATATCAAGG
GCAGAGCTTG GTGAATGTAA TCCGCTTGGT ATTACTGGTG AAATAGCTGA TATGGCAACT
CAGGTGACCA TCACTCCTAA TGATTATGCT ACAAGTACAT ATACTAGTTT TGACGGTGTG
AATGCTGCTG GAGGGGTTGC TCCTGTAGCA CTCGATGTTT TAGGTCAAAG TAAAAACGTT
TACGTTTTTA ATAACTTTAA TACCGGGCAG GGGGCGCAAA AAGAAGTGGT AATAACGGGT
GATGTAACCC TTTATATAAA AAATAATATG ACCACAAAAA ACACAATATT TACTCTCGCA
GATAATAGTT CATTAACTAT CTTTATCGAA GGAAAGATGG ATATTGAGAC AGGCTCTGAT
ATTTTTTCCG ATCAGTCTGT CAGTGCTCAT GGCAAAGCCC CGTTAACAGT ATACTCCTCT
AATAACACTT ATGATGCGGT GACGCTTAGT GGTAACGGCG AGATTTATAT GAACCTTTAT
GCGCCTTTGG GAACCATTGC TTACAATGGC AATGGAAATA TTATGGGAGC GCTACGTGGA
GAAGTTGTTG ATATTTCCGG AGGTGGGGAC ATACATTACG ATCAAGGTCT TGGCGAACCA
GCCTCATACT GTGCTATTTA TTATTACTAT CCGGAAAATC CCGGTACCGT GGAGACTTTG
GAAGCTGAGG ACTACAGGGT CTACTGCGGC GATGATCTTG ATATATCCCC GTTTATATCC
CCGTTTCAAT CCTATGCTGC AATAGCCGGT GGCTATATAA GTATAGCCGC AAACTCCACA
GTAAACGGTG ATCTCGCTGC ACAAGGGTAC GTTAGTATCT ATGATAATTC TGTAGTTCAC
AACATCTATG CTGGCGGTTA TGTGAGCACA GCTAATCCGT CTACCGTTGA AAACATCTAT
GCTGGCGATT ATGTGACCAT AGGTGCTAAC GCTATTGCCC AAAACATCCA TGCCGGAGCC
GCCATTACCG TATACGCGAA TGGTGATGTC CAGGCGGTCT ATGCTGGCGC AGCCATCACC
TTGAGCGCGG GCGCTTCGAC GAATGGCGTT TTAGCTGAGG ATGCCAACTC AGATGACTAT
GTTGAAGCGG GCGATATACA TAATGCTGGT AATATGACAG AAATGATAAC GCTGATAACG
GAGACACAGT CCGCTTTATC TGACCTCGTG CTATCCCCTT CTAATGGACA ATTACCACCT
CCCACTATGG GAACACGCAC GTTAGCGCCT GGTGTATGGG AAGAAGACAG TGCCCTGAGT
ATAACTGCAA GCTCAACCAT TACCTTTGAT GCGGATAAGT TTACTGATAA TGAGGACCAT
GTTTGGGTTA TTAACCTTAG TGGGGCGCTG AAGGTTAGTG ATTCGACTAA TATCAAGATA
ATTGGTTTGG ATAAAGGCGA TACCGCTACT ATCATTTGGA ATGTAGGCAC TGCGCTCGAT
CTCGTTGCTG ACACTTCTTT GGATGACACC GATACCGCTA CTATCATTTG GAATGTAGGC
ACTGCGCTCA CCATGGGTGC TCGCACCTCT TTCCGTGGCA CCGCATTTGT AGGGGGACCC
ATTACCGCGG CGACTTCATC GGTTAGTTGT GGTCACTTGT ATGCAACGGG CCTCATTAGT
ATCGGTAGCA TCGGGGTCGA TAGTGCAGGT AGTCCAGTCA CTTGCGAAAA TTCAGATGCT
GTCTTCACTT ATCTGGAGAC ACTCAATTAA
 
Protein sequence
MKQKGFVLVS VLIITTITTM LAFSQLKTNS LQERMAGNQQ KEINARLAAE KGIFKGFDDI 
KSGGTTEQML SDLNDFASDE DKDYSFSSLD SYGNNLFALV STGKFGGATA HLKAVIKSPE
GDAIIACESV NVSGNGSIEG DVTVIEGNAT FSGNGSIAGY VTASGSVTGV PEDYYSVISR
AELGECNPLG ITGEIADMAT QVTITPNDYA TSTYTSFDGV NAAGGVAPVA LDVLGQSKNV
YVFNNFNTGQ GAQKEVVITG DVTLYIKNNM TTKNTIFTLA DNSSLTIFIE GKMDIETGSD
IFSDQSVSAH GKAPLTVYSS NNTYDAVTLS GNGEIYMNLY APLGTIAYNG NGNIMGALRG
EVVDISGGGD IHYDQGLGEP ASYCAIYYYY PENPGTVETL EAEDYRVYCG DDLDISPFIS
PFQSYAAIAG GYISIAANST VNGDLAAQGY VSIYDNSVVH NIYAGGYVST ANPSTVENIY
AGDYVTIGAN AIAQNIHAGA AITVYANGDV QAVYAGAAIT LSAGASTNGV LAEDANSDDY
VEAGDIHNAG NMTEMITLIT ETQSALSDLV LSPSNGQLPP PTMGTRTLAP GVWEEDSALS
ITASSTITFD ADKFTDNEDH VWVINLSGAL KVSDSTNIKI IGLDKGDTAT IIWNVGTALD
LVADTSLDDT DTATIIWNVG TALTMGARTS FRGTAFVGGP ITAATSSVSC GHLYATGLIS
IGSIGVDSAG SPVTCENSDA VFTYLETLN