| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ping_3184 |
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| Symbol | |
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| ID | 4624789 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychromonas ingrahamii 37 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008709 |
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| Strand | - |
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| Start bp | 3928502 |
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| End bp | 3930049 |
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| Gene Length | 1548 bp |
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| Protein Length | 515 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 639798288 |
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| Product | outer membrane efflux protein |
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| Protein accession | YP_944471 |
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| Protein GI | 119946791 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.911982 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCTTTA GAAAAACCTT ACTCGCAACT TCACTAACCC TGGCTATCAG TGGTTGTTCT
GTTACACCAA ACGCAATTTC TCCAGGTGAT ATGGCCGGGA CTGCAAAAAG TGATATTGAG
CAACTATCTC AACAACCCGC CGTTGAACAA GCCATTACAT TAAATGATGC CATTGCTCGG
GCTGTTCTTA ATAACCGTGA TAAAAAGCTT AAAGTACTTG AATCAGCACT TTCTCTTGGG
CAGATGAAGC TAGTTCAGCA TCAGATGTTG CCTAGTTTGA CAGCCTCAGC CGGATATACA
CAACGTGATA ATTACGCGGG TTCGGCAAGC GCAAGTTTTT CTAATGGAGT GCCTGATCCG
CTCGGGACTA ATCCTGCTTA CTCGGTTTCT CAAGAGAAAA TACGTGATAC GCAAAGTATT
GCTTTTACTT GGAATATTCT TGATTTTGGG CTTTCTTATG TGCGTGCTAA TCAGTATGCC
GATCGTTATC TTATTAGCAA AGAACGTGAG CGTAAAGTTG TTCATAATAT CACGCAAGAT
GTTCGTGCCG CTTATTGGCG TGCGGTATCG GCCGAGCGAC TATTAACTAA AATTAACCCA
TTGATTGAAA AGGCGGCAAA TGCGCTTAAA AATTCACGTC AGATAGAAAC TAAACAACTA
CAGCCACCTT TAGAAGCACT TTATTATCAG CGTGAATTAC TTGATATTTT GCGTGCTCTG
CAATCCTTAC GTCAAGATCT GGTCGGTGCT AAGACTGAGT TGGAAAGCTT AGTGGGTCTT
AAGCCTGGCA CACAATTTGA ACTCGCTGAT GTGAATACAA CGTTAAAGCA AATTCCTGAA
CTGTCTGTTG AACTTGACGA CATGGAAGAG CTGGCGTTAC AACAACGACC TGAGTTAATT
GAAAATTATT ATCAAAAACG CATCTCAGCG GCAGAAACCA AGGCGGCAAT GCTCGATATG
CTTCCCGGTA TTAATTTAAC AGCAGGCGTT TATGCTGATA GCAATGATTA TCTGCTTAAC
CAGGATTGGA CCAGTATGGG TGCTCAGGTC AGCTGGAATT TGTTAGATAT GTTTAAGATT
GGTACAGAAT TGGATATGGC TAAAACGCGT ATTGCCTTAG TCAAAGAGCA ACGATTAGCC
GCTTCAATGG CGGTCTTAAC ACAAGTGCAT CTTGCCCGTA TCCGTTATCA GCAGGCGCGT
AAAACCTTTG ATTTAGCGGG CAATTACTTG AATGTAGCAG AACGAATCAG CGAACAGACG
GTAAAGGCGG CAAGCATGCA GCGCGCTTCA TCGCTTGATT TGATTCGTGA ATCCTTAAAT
ACGCTACTCG CGGAATTGCG TCGTGATGTG GCTTATGCGG GTCTGCAAAA TAGTTATGGT
CGTATCTATG TGACTATGGG GATGGATTTA CTCCCAGAAG ATTATATGCA GATTGAGTTA
CCGGAATTGA GTAAGCGGAT TGGCCAGCGT TTTGAGCAAT GGGAAAAAGG TGAATTAAAG
CTCAACATTG AATCTGCCGT TGAAGCAGAA GAGAGCAAGG GGCAATAA
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| Protein sequence | MFFRKTLLAT SLTLAISGCS VTPNAISPGD MAGTAKSDIE QLSQQPAVEQ AITLNDAIAR
AVLNNRDKKL KVLESALSLG QMKLVQHQML PSLTASAGYT QRDNYAGSAS ASFSNGVPDP
LGTNPAYSVS QEKIRDTQSI AFTWNILDFG LSYVRANQYA DRYLISKERE RKVVHNITQD
VRAAYWRAVS AERLLTKINP LIEKAANALK NSRQIETKQL QPPLEALYYQ RELLDILRAL
QSLRQDLVGA KTELESLVGL KPGTQFELAD VNTTLKQIPE LSVELDDMEE LALQQRPELI
ENYYQKRISA AETKAAMLDM LPGINLTAGV YADSNDYLLN QDWTSMGAQV SWNLLDMFKI
GTELDMAKTR IALVKEQRLA ASMAVLTQVH LARIRYQQAR KTFDLAGNYL NVAERISEQT
VKAASMQRAS SLDLIRESLN TLLAELRRDV AYAGLQNSYG RIYVTMGMDL LPEDYMQIEL
PELSKRIGQR FEQWEKGELK LNIESAVEAE ESKGQ
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