| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ping_3123 |
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| Symbol | |
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| ID | 4625915 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychromonas ingrahamii 37 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008709 |
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| Strand | - |
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| Start bp | 3844081 |
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| End bp | 3845073 |
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| Gene Length | 993 bp |
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| Protein Length | 330 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 639798236 |
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| Product | tRNA-dihydrouridine synthase A |
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| Protein accession | YP_944419 |
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| Protein GI | 119946739 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0042] tRNA-dihydrouridine synthase |
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| TIGRFAM ID | [TIGR00742] tRNA dihydrouridine synthase A |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATAAACC CAGATACAGC CTGCATTTAC CCAAGCAACC GCTTCTCCAT AGCACCGATG
CTCGATTGGA CGGACAGGCA CTGCCGATAC TTTCATCGTG TTATGAGTAA AAATACTTTG
CTCTATAGTG AGATGGTAAC GACTGGCGCT ATCTTATATG GCAAAGGGGA TTACCTGCAA
AAAGATGCGG CTGAACATCC GGTTTGTCTG CAATTAGGCG GATCAGCACC GGTTGATTTA
GCCACCTCGG CACTGGCAGG TAAAGAACGC GGCTTTGATG AGATTAATTT AAATGTTGGC
TGCCCATCGG ATCGTGTGCA AAACGGTCGC TTTGGTGCTT GTCTGATGTC GGAAGGTGAG
TTGGTTGGTG ATGCCATAAA AGCCATGAAA GATGCAACGG GTTTACCCGT CTCGGTGAAA
ACACGGATCG GCATTGATGA TTTAGACTCC TACGCTTTTT TATGTGACTT TGTTGGTAAG
GTTGCGGAAA AAGGCTGTGA TACTTTTGTC GTGCATGCAC GTAAAGCCTG GTTGAGTGGT
TTAAGCCCTA AACAAAACCG TGATGTACCA CCACTTGATT ATGAGCGTGT ATACCAACTA
AAAAAAGATT TTCCGCAGTT GACCATTGCT ATCAATGGCG GTATTAAAAC GCTTGATGAA
TGTGAAACTC ATCTACAATA TCTTGATGGT GTTATGTTGG GCAGAGAAAT TTACACTAAT
CCTTATTTAT TAAGTTCTGT TGATCAGCGC TTGTTTGCCG GCAATGAAAA AATATTAACC
CGCTTTGAGG TGTTAGAAAA GATGTATCCC TATATTGAGC AGCAACTCAG CAATGGGGCG
TATTTTAAGC ATGTTGCCCG TCATATGTTG GGATTATTCC AAGGTCTGCC GGGTGCGCGG
GCTTGGCGTC GCCATCTGAG TGAAAACGGC CACTTGCCGG GAGCTGGCAT TGAAGTGATG
GAAAAAGCGG CGGCATTTGT TGTTGAGGGT TAA
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| Protein sequence | MINPDTACIY PSNRFSIAPM LDWTDRHCRY FHRVMSKNTL LYSEMVTTGA ILYGKGDYLQ
KDAAEHPVCL QLGGSAPVDL ATSALAGKER GFDEINLNVG CPSDRVQNGR FGACLMSEGE
LVGDAIKAMK DATGLPVSVK TRIGIDDLDS YAFLCDFVGK VAEKGCDTFV VHARKAWLSG
LSPKQNRDVP PLDYERVYQL KKDFPQLTIA INGGIKTLDE CETHLQYLDG VMLGREIYTN
PYLLSSVDQR LFAGNEKILT RFEVLEKMYP YIEQQLSNGA YFKHVARHML GLFQGLPGAR
AWRRHLSENG HLPGAGIEVM EKAAAFVVEG
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