Gene Ping_3110 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_3110 
Symbol 
ID4625902 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp3825230 
End bp3826603 
Gene Length1374 bp 
Protein Length457 aa 
Translation table11 
GC content30% 
IMG OID639798223 
Producthypothetical protein 
Protein accessionYP_944406 
Protein GI119946726 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.154922 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGAACT GTTATTTTTG TAAAAAAGAA TTCGATACTG TTAATGTTAG AATGCATGAT 
GAGCACATAA TACAAAATTC AATTGGTGGT AAATTGACGT CATCAGATAT CCTTTGTGAA
AAATGTGGTG GGGTTTTAGG ACAAAATGTT GATGAAGCTT TTACTCGTAA TCTTTCTCCT
CTTTCTGTTC TGTTGGATTT AGCAAGGGAT CGCGGTGAAA GCTCAAAATC AAGAATTAGA
ATTGTTATGA ATGATGGCTC AGTGTTAAAT GATGATAATG TAACGTTTGA GTTAAAAAAT
GACTTCTCCA TAATACCATC AAGACCAGTT TATATTCTCA ATGAGGATGA AAAAACATTA
AATATTTTTG GGGCTACGCT TAAACAAATC AATCAATTCG AAAAAAGCAA AGTCATAAAA
AAACTAATTA ATGAGGGATA TAAGGTAAAG AAAGAGGTAA ATGTAGCGTC TTATGTCAAT
TCTGCTGTAT TAGATATTAA CTATGAATCA CCTGATATTC TTAGAGGTAT ATTAAAAGCT
GCTATAGGTT TCGCTTCTCA CCATGGTGTT CCTAATAAGT ATTTATCTCA ACTGACTAAT
GTTTCAAAGT TGATTGACAG TGATAATTTT ATACATAATC GCGTTTGGCA GTATTATCCA
ACAACAGATG AAGAAAAAAT CTATGAAACT AATAAAGAAA AGCATGAGGA TTGGTACCCA
AATCATCAAA TTTATTTATT TAATATAGGT GAAAATTTAT ATTGTTACGT AGAGTTATTT
GGCGTCATAC AAAAATACGT TCATTTGACT GATAGTTATG ATGGAGATGA AATAAGAGAA
AAATACCTAC AAAAAACGAC TAAGTGGGAG TTTAATGAAG AAGATTGGAA ACCGAGACGT
TTAAGTGACT TGCAAATATT AGCTCAACAA TTTGATGTAC CATATAGCAA TGAAAAGATT
GACGATATAG GAAAAACTAT TTTGCAAAGA GCAAGATCAA GATCTTATAT TATAGATTCT
GAGTCACAAA CTGAAAAGGT TGAAAAAATA ATGCAAAGTA TAATTTTGTA TACAACCTCA
GATATAAGAG GATATGCTAT TGTTGATGAG CTACACGATA AGGCTGATAT GGCAAAATCA
AAGTTTAATT TTTCGCTTGT AGATAAGATA AAGAATAACC CATTGAGTGC TATGCAATTG
ATGCATAAAG ATTATTCTGA CTTTAGAATT GGTGATGTTA ATAATAGCTG TCCTCTAAAA
TCTAAAAGTT TATCTGAAAA TGCAAAAAAC AAATATGTGG CTTATAAAGC GTTTGAGTTA
TTATCTAGCT TAAATCTTGA AAATAAAATT GAATTTAAAG TTATTGACCC GTAA
 
Protein sequence
MKNCYFCKKE FDTVNVRMHD EHIIQNSIGG KLTSSDILCE KCGGVLGQNV DEAFTRNLSP 
LSVLLDLARD RGESSKSRIR IVMNDGSVLN DDNVTFELKN DFSIIPSRPV YILNEDEKTL
NIFGATLKQI NQFEKSKVIK KLINEGYKVK KEVNVASYVN SAVLDINYES PDILRGILKA
AIGFASHHGV PNKYLSQLTN VSKLIDSDNF IHNRVWQYYP TTDEEKIYET NKEKHEDWYP
NHQIYLFNIG ENLYCYVELF GVIQKYVHLT DSYDGDEIRE KYLQKTTKWE FNEEDWKPRR
LSDLQILAQQ FDVPYSNEKI DDIGKTILQR ARSRSYIIDS ESQTEKVEKI MQSIILYTTS
DIRGYAIVDE LHDKADMAKS KFNFSLVDKI KNNPLSAMQL MHKDYSDFRI GDVNNSCPLK
SKSLSENAKN KYVAYKAFEL LSSLNLENKI EFKVIDP