Gene Ping_3107 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_3107 
Symbol 
ID4624268 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp3820109 
End bp3821581 
Gene Length1473 bp 
Protein Length490 aa 
Translation table11 
GC content42% 
IMG OID639798220 
Producttransposon Tn7 transposition protein C 
Protein accessionYP_944403 
Protein GI119946723 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.0459795 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTATTA AGAATAAAAA ATTACCAGTG ACAATAACCC CCGCGCAATA CCGCGATACG 
GAAGTTGAAG CATATAAAAA CAACCCATTG ATACTTGGGT TACCCAATAG AGTCGATCCA
AAGCGATTTA GGCAAGTGTT AAGTCAAAGA GTTCCTTCTC CTGAATTCAG CCATCTTTTG
GATTCTGACC GGGTTGAAGT GATAAAGCAA TTGCGTAAAA CCCGTATTAT TACGACTGAA
CATTTAGATT TGTATAACGA ATTGTATGAT GCGCTTAGTC ATGGCTATGT TGATCGGAAT
CCCAGCAGGC CGGAGGTAGT CGCATGGAGC TATGATATAG CCGACAATAC TATTCCATTA
GAGAATATAG AAAGGCCTTA TTTAGATGCA ATATCGGCTC AAACAACGGC TGATGCTATA
TTTGTAACAG GGTTCACTGG TAATGGTAAA TCAACCATTA ATAATCTCAT TATGACGGCG
CTCTTTCCAA TGGTTATTGA ACATCACTGG GAGGGGTTTA ATGAGCCTCA GATTGTGTTT
ATTAAGGTAG ACATGCCCCA TAACGGCAGT CGTGCGGTCC TTATTGAACG AATATTACAA
GAGGTTGATA GAGCGTTAGC GGAGACAAGC TTTGGCAAAA CAAATTATGC TGCGACTTGT
AAAACTAAGG GTGGAAAATA TACAGATATC TCCAGTATGG AAGGGGTCTT ATTAACAGTA
TTAAATCGCC ATCATGTTGG ACTGCTTATT ATTGATGAAT TTCAAAACCT ACAAGTCGCC
TCTGTTAGGT TTAGAAACGA AATGCTGCAA TTTTTCGACA CCTTAATTAA TCAGCTCGCG
GTGCCAAATA TTAAAATAGG TACACCCGAC ACCATATTGT TATTCGACTC CCAAGGCCGC
CACAAGCGGC GAATTGGAAT GGTGCTTGAA CTTATGCGCT TTGAAGGCGA AAAGGATTGG
GACCGCGCGA TGAAAGCTAT TTTCGGCTTT CAGCCTATTG ATAAGCCTAT TAAACGCAAT
GAAAATATTG AAGCGCTTCT CCACGATTTA AGCGCAGGAG TCCCCTCTAT ATTAATGGCA
TTATGGGAGG GCTGCCTGAT TGAAGCTGTA CGCTCTGGTT GTGAAACAGT TACTCAAGCG
CTAATTAAGC GTGTTTTTAA AAAGCGTTTC CCGCTTATGC GCTCTGTAAC TCGTAATATT
AACAAAGGTA CTAAAGGTCG GCATTCTGAT TTATTGACAG TGCAACAATA TTTAGACGCA
GGCAATCGCA CGCTTGCCTT AAAACATTTG AACCACTTTG CTGTGAACGT TCAAGGGCCG
GCGGCACAAG CGGTTAAGCA AGATATTGAT GCGCTTATCG AACAGCAAGA GTTCTCGCTA
GCTCAATTGA AAAAATTGGA TGCCATCAAA TTAGGGTTAA AAAAGAATGC TACCGGTCAT
CGAGAGCCGC AAACCTTAGA GCACAATGAA TGA
 
Protein sequence
MAIKNKKLPV TITPAQYRDT EVEAYKNNPL ILGLPNRVDP KRFRQVLSQR VPSPEFSHLL 
DSDRVEVIKQ LRKTRIITTE HLDLYNELYD ALSHGYVDRN PSRPEVVAWS YDIADNTIPL
ENIERPYLDA ISAQTTADAI FVTGFTGNGK STINNLIMTA LFPMVIEHHW EGFNEPQIVF
IKVDMPHNGS RAVLIERILQ EVDRALAETS FGKTNYAATC KTKGGKYTDI SSMEGVLLTV
LNRHHVGLLI IDEFQNLQVA SVRFRNEMLQ FFDTLINQLA VPNIKIGTPD TILLFDSQGR
HKRRIGMVLE LMRFEGEKDW DRAMKAIFGF QPIDKPIKRN ENIEALLHDL SAGVPSILMA
LWEGCLIEAV RSGCETVTQA LIKRVFKKRF PLMRSVTRNI NKGTKGRHSD LLTVQQYLDA
GNRTLALKHL NHFAVNVQGP AAQAVKQDID ALIEQQEFSL AQLKKLDAIK LGLKKNATGH
REPQTLEHNE