Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ping_3107 |
Symbol | |
ID | 4624268 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychromonas ingrahamii 37 |
Kingdom | Bacteria |
Replicon accession | NC_008709 |
Strand | - |
Start bp | 3820109 |
End bp | 3821581 |
Gene Length | 1473 bp |
Protein Length | 490 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 639798220 |
Product | transposon Tn7 transposition protein C |
Protein accession | YP_944403 |
Protein GI | 119946723 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.0459795 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTATTA AGAATAAAAA ATTACCAGTG ACAATAACCC CCGCGCAATA CCGCGATACG GAAGTTGAAG CATATAAAAA CAACCCATTG ATACTTGGGT TACCCAATAG AGTCGATCCA AAGCGATTTA GGCAAGTGTT AAGTCAAAGA GTTCCTTCTC CTGAATTCAG CCATCTTTTG GATTCTGACC GGGTTGAAGT GATAAAGCAA TTGCGTAAAA CCCGTATTAT TACGACTGAA CATTTAGATT TGTATAACGA ATTGTATGAT GCGCTTAGTC ATGGCTATGT TGATCGGAAT CCCAGCAGGC CGGAGGTAGT CGCATGGAGC TATGATATAG CCGACAATAC TATTCCATTA GAGAATATAG AAAGGCCTTA TTTAGATGCA ATATCGGCTC AAACAACGGC TGATGCTATA TTTGTAACAG GGTTCACTGG TAATGGTAAA TCAACCATTA ATAATCTCAT TATGACGGCG CTCTTTCCAA TGGTTATTGA ACATCACTGG GAGGGGTTTA ATGAGCCTCA GATTGTGTTT ATTAAGGTAG ACATGCCCCA TAACGGCAGT CGTGCGGTCC TTATTGAACG AATATTACAA GAGGTTGATA GAGCGTTAGC GGAGACAAGC TTTGGCAAAA CAAATTATGC TGCGACTTGT AAAACTAAGG GTGGAAAATA TACAGATATC TCCAGTATGG AAGGGGTCTT ATTAACAGTA TTAAATCGCC ATCATGTTGG ACTGCTTATT ATTGATGAAT TTCAAAACCT ACAAGTCGCC TCTGTTAGGT TTAGAAACGA AATGCTGCAA TTTTTCGACA CCTTAATTAA TCAGCTCGCG GTGCCAAATA TTAAAATAGG TACACCCGAC ACCATATTGT TATTCGACTC CCAAGGCCGC CACAAGCGGC GAATTGGAAT GGTGCTTGAA CTTATGCGCT TTGAAGGCGA AAAGGATTGG GACCGCGCGA TGAAAGCTAT TTTCGGCTTT CAGCCTATTG ATAAGCCTAT TAAACGCAAT GAAAATATTG AAGCGCTTCT CCACGATTTA AGCGCAGGAG TCCCCTCTAT ATTAATGGCA TTATGGGAGG GCTGCCTGAT TGAAGCTGTA CGCTCTGGTT GTGAAACAGT TACTCAAGCG CTAATTAAGC GTGTTTTTAA AAAGCGTTTC CCGCTTATGC GCTCTGTAAC TCGTAATATT AACAAAGGTA CTAAAGGTCG GCATTCTGAT TTATTGACAG TGCAACAATA TTTAGACGCA GGCAATCGCA CGCTTGCCTT AAAACATTTG AACCACTTTG CTGTGAACGT TCAAGGGCCG GCGGCACAAG CGGTTAAGCA AGATATTGAT GCGCTTATCG AACAGCAAGA GTTCTCGCTA GCTCAATTGA AAAAATTGGA TGCCATCAAA TTAGGGTTAA AAAAGAATGC TACCGGTCAT CGAGAGCCGC AAACCTTAGA GCACAATGAA TGA
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Protein sequence | MAIKNKKLPV TITPAQYRDT EVEAYKNNPL ILGLPNRVDP KRFRQVLSQR VPSPEFSHLL DSDRVEVIKQ LRKTRIITTE HLDLYNELYD ALSHGYVDRN PSRPEVVAWS YDIADNTIPL ENIERPYLDA ISAQTTADAI FVTGFTGNGK STINNLIMTA LFPMVIEHHW EGFNEPQIVF IKVDMPHNGS RAVLIERILQ EVDRALAETS FGKTNYAATC KTKGGKYTDI SSMEGVLLTV LNRHHVGLLI IDEFQNLQVA SVRFRNEMLQ FFDTLINQLA VPNIKIGTPD TILLFDSQGR HKRRIGMVLE LMRFEGEKDW DRAMKAIFGF QPIDKPIKRN ENIEALLHDL SAGVPSILMA LWEGCLIEAV RSGCETVTQA LIKRVFKKRF PLMRSVTRNI NKGTKGRHSD LLTVQQYLDA GNRTLALKHL NHFAVNVQGP AAQAVKQDID ALIEQQEFSL AQLKKLDAIK LGLKKNATGH REPQTLEHNE
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