Gene Ping_3106 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_3106 
Symbol 
ID4624267 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp3819210 
End bp3820112 
Gene Length903 bp 
Protein Length300 aa 
Translation table11 
GC content44% 
IMG OID639798219 
Producttransposon Tn7 transposition protein D 
Protein accessionYP_944402 
Protein GI119946722 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.0387567 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGCGAA TGCCTGATTT GATGTGCGAT GAGCATCTTT ATAGCGGCTT TATTCGAGGT 
CGATTTTTAA GTGGGCAGAT GCATTTAAGT GTTAAGCGAT TTTTTGATTT GAATAATATT
AAATATCATT TGTTACGCTC ACAGGTTCCT CTTTGCTCAA ATTTGCGCAG TGTGGTTGAG
GCGATGGCAT CTGAAAAAAC AGAGCAGTTT GCGTTGCGTT TAGCACACAC TCCGTTTGCT
CCTTGGTTAC TAAGTTCTGA AGATGGAATG TTACCTGAAG ATCTGACTGC TGCGGGGAAT
CGGAATAACC TAGAAGAAAA TCCGTATTCG GTAGATAGGC GATGGAAGTT TTGCCCTGAG
TGCGCAATAG GTGAACGGAA GCGCTTGGGG TTTTCTTTCT GGCATGCAAG CCATCAGCTA
CTTGGAGCTA GAATATGCCC AACCCACCAA GTAGCTCTGC ACAGCCACGA TGAGCTGCGC
TATTTAAATT TCACCCTGCC ATACCATTGG CTAGGTAAAT CGGAGGCCTT GAGCTGCACT
GCGTGGCAAT TGGAATGGCA GGCATTTATC TATGCAGTAT CAAGCGCCAT TGAGGCCGAT
ATTGAGTGGG CAACGCGCGT TAAAATAGCG ATTAGAGAGG AACTCAATAT TACTGATGGG
GTCAAACAAA GCGATAAAGT GACGTTTGAT AAGCTATTTG AAATAATGAA AAGTGATTTG
GGGCAAGACT GCCTGGTTGG TCTTTTCACC GCTTTTGCCC CTCACCGGAA AATTCGGACA
AATATTTTAT GGGTTACGTT ATCTGGCCAT AGTCAGGCAA AAGGACTACG TCATCCCTTA
TATTGGTTAG TTATTATCTT TTGGTTGCGT GATAAATTGC CTGAATGTAG TGAGTTGCTA
TGA
 
Protein sequence
MMRMPDLMCD EHLYSGFIRG RFLSGQMHLS VKRFFDLNNI KYHLLRSQVP LCSNLRSVVE 
AMASEKTEQF ALRLAHTPFA PWLLSSEDGM LPEDLTAAGN RNNLEENPYS VDRRWKFCPE
CAIGERKRLG FSFWHASHQL LGARICPTHQ VALHSHDELR YLNFTLPYHW LGKSEALSCT
AWQLEWQAFI YAVSSAIEAD IEWATRVKIA IREELNITDG VKQSDKVTFD KLFEIMKSDL
GQDCLVGLFT AFAPHRKIRT NILWVTLSGH SQAKGLRHPL YWLVIIFWLR DKLPECSELL