Gene Ping_3084 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_3084 
Symbol 
ID4624023 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp3786352 
End bp3787242 
Gene Length891 bp 
Protein Length296 aa 
Translation table11 
GC content47% 
IMG OID639798199 
Producthypothetical protein 
Protein accessionYP_944382 
Protein GI119946702 
COG category[R] General function prediction only 
COG ID[COG3687] Predicted metal-dependent hydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.531586 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.157485 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAGAAC CCCTGTATGA ATATCAGCCC AAGGATGTCG ATCAGATCGT AGTAAGGAAT 
TTCACTTTTG ATTTTCCGGA GGACCTTGAT CCGGTTTGGA TACCCGGTAA CCCGGTGCGC
TCGCACTTAT TTAATGGCTT TTCCCTGATC ATGCCTTACC TTGAACCCTA CCTGATACAT
TCGATACTGA GAGCGCGCGA GCATATTACT GACCCTGAGC TGCTGAAAGA TCTCGCGGGC
TTTAATCGGC AGGAGGCAAA TCATTTCAAG TGTCATCGCA AGTACAATGA GTTATTGAAA
GCCAATGGCT ATCCTGAGTT GGAGCGGCTG GAGAAGCATA TGACCAAGGC TTATGCCCGC
CTTGAGAAAA GAAGCTTACG CACTCAGTTG GCCTACTCAG CTGGTTTTGA GTCTATTACA
AATGGCTTTA CTCACTGGCT TATCAACAAA CGCGTTGCGC TTTTCGGCGG TGCGGACCGA
CATGTCAGTT CCTTCTGGAT CATGCATATG ATTGAAGAAG GAGAGCACAA AACGGTAGCT
TACGATGCCT ATATGGCTTG TTCAGGCCAG TACTTCGCTC GCTTCCTGGG TGTTTTTCAC
GGCAGTTGCC ACGTCATGGG ACTGGGATTT TGGGGGATGT GCATTGCGCT TAAAAAAGAC
AAAATATTGT ATCGTCTAAA AACGCTGTTT CAGATAGCCA AAGAAATAGT TAATTTGTGT
GTAGAGGTTG GTCCTTTTAT GTTCAGGGCT CTGCTGCCCG GCTTTAATCC CAGAAAAGAG
GCAGATCCAC AGTGGATGAA AGATTGGATC AAAGGCCACG CAACACTGCC GAAGGACGCG
CTTATCCCGT TGCTTGATAC CAGTAACCCG GAGATGCCCG TGCCTTTTTA A
 
Protein sequence
MTEPLYEYQP KDVDQIVVRN FTFDFPEDLD PVWIPGNPVR SHLFNGFSLI MPYLEPYLIH 
SILRAREHIT DPELLKDLAG FNRQEANHFK CHRKYNELLK ANGYPELERL EKHMTKAYAR
LEKRSLRTQL AYSAGFESIT NGFTHWLINK RVALFGGADR HVSSFWIMHM IEEGEHKTVA
YDAYMACSGQ YFARFLGVFH GSCHVMGLGF WGMCIALKKD KILYRLKTLF QIAKEIVNLC
VEVGPFMFRA LLPGFNPRKE ADPQWMKDWI KGHATLPKDA LIPLLDTSNP EMPVPF