| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ping_3031 |
|---|
| Symbol | |
|---|
| ID | 4625117 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychromonas ingrahamii 37 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008709 |
|---|
| Strand | + |
|---|
| Start bp | 3728570 |
|---|
| End bp | 3729580 |
|---|
| Gene Length | 1011 bp |
|---|
| Protein Length | 336 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 639798149 |
|---|
| Product | pyridoxal-5'-phosphate-dependent enzyme, beta subunit |
|---|
| Protein accession | YP_944332 |
|---|
| Protein GI | 119946652 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG2515] 1-aminocyclopropane-1-carboxylate deaminase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.857502 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGCACCCAC CACAGAATCA ATCTCAAGAT CAAGCAAGCA ATGGCTTACA ACAACTTGAA
AAAAAAATGC AAAGCATTAT TGCCCCCTCC CCATTGCAGA AAATTGAACA TCCTTTATTA
GATTTTTGGC AGTTAACCCT GTCGGTTAAA AGAGATGATC TTTTACATCC GGCAATATCT
GGGAATAAAT GGCGGAAATT AAAGTACAAC TTATTGGAGG CGCGCAGACA ACAAGTTGAT
CATATTATTA GTTTTGGCGG TGCTTATTCA AACCATATTC ATGCACTTGC TGCTGCAGGA
TTTTATTTTG GTTTTAAAAC CACTGCCATT ATCCGTGGAG AGAGTTGGTA TGCAAATAAC
CCCACACTAA AACAAGCCTT AGCATGGGGA ATGGAGTTAC AATTTGTGAC TCGCCAGGAA
TATAAACAAA GAGCAGAGCC TGCCTACCTG CAATCTTTAC AGAGCGCCTA TCCGAACGCT
TTTATTGTGC CCGAAGGGGG CAGCAACCGA TTTGCCCTAC GCGGGGTAAT AGAAGCGCTA
CAGGAAATTC AACAACAAGC AAGTGTTACT GTTGATCATA TTATAACGGC CACCGGCAGT
GGCAGTACGT TAGCAGGACT GGTTGCAGGC ATAGCACAAT CGCAACGACA ACCGAAAGTA
ACAGGTATTG CCGTGTTAAA AAATGCACAC TATCTTAATC AAGAAATAGC CTTACTATTG
CAACAGGCCA AGATCAACAA TAAGAATAAC TGGCGCTTAC AAACAGAATT TCACCATGGG
GGTTATGCCA AAGTACCGCT TGAATTAAAC CATTTTTGTG AGCAGTTTAG CCTGCAAACG
GGCATTCCCG TTGAACCTAT TTACACAGGC AAAATGTTTT ATGGCTTATT TAAACTTATC
GAACAAGGCT ATTTTAACCG AGGCGAACAT ATCGTTGCCC TGCACACTGG CGGTCTGCAG
GGGTTAGACG GATTAAAAGA GAACAGGAAA GAGAGAACAG ATCTGACTTA A
|
|---|
| Protein sequence | MHPPQNQSQD QASNGLQQLE KKMQSIIAPS PLQKIEHPLL DFWQLTLSVK RDDLLHPAIS
GNKWRKLKYN LLEARRQQVD HIISFGGAYS NHIHALAAAG FYFGFKTTAI IRGESWYANN
PTLKQALAWG MELQFVTRQE YKQRAEPAYL QSLQSAYPNA FIVPEGGSNR FALRGVIEAL
QEIQQQASVT VDHIITATGS GSTLAGLVAG IAQSQRQPKV TGIAVLKNAH YLNQEIALLL
QQAKINNKNN WRLQTEFHHG GYAKVPLELN HFCEQFSLQT GIPVEPIYTG KMFYGLFKLI
EQGYFNRGEH IVALHTGGLQ GLDGLKENRK ERTDLT
|
|---|
| |