Gene Ping_2955 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_2955 
SymbolfrsA 
ID4623471 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp3641991 
End bp3643250 
Gene Length1260 bp 
Protein Length419 aa 
Translation table11 
GC content39% 
IMG OID639798073 
Productfermentation/respiration switch protein 
Protein accessionYP_944256 
Protein GI119946576 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1506] Dipeptidyl aminopeptidases/acylaminoacyl-peptidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.283852 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.148271 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTGAAA ATTTATCTGA AACGCTGTTT GTACATAAAT CTAATGTACA AGAAACATCA 
ACTATTGTTG CTAACTCTGC AACGAAAAAA AACCATAAAC AAAATAATGT TGTTATGGAG
GGAGAAGAAA AACCGGGTTG GTATCGTTTA TTAAAGTTTA TGCTGTGGTC TTGGCAAGGT
TTAGACCTTA TTGAGTGTTC CGAGGTGCTC GCCCGTATTG CTGTGTCAAC ACATCCCCGC
AGTGATCAAG AGTTATTAGA TAGCGTAATA GGTTTTCATT CGGGAAATTG GAGCTATGAG
TGGACGCAGA AAGCTATGTT TTATTACAAA CAAGGTAAAG CATATGCTCA GCAGGGTGAG
CCTGAAAAGG CCAAAAAAGC GTATTATTTA GCGTCACAAT TTTATAGTGT TGCCAGTTAC
CCACACTTAA AAGGAGATGA ATTAAGCCTC CAGGCTCAAG CGTTAGCATT TAATAATTAT
AAAGAGTCAG CAAAATATAA TCATAATATG ATTTTAAAAG AGATTAAAGT GCCATTCCAA
GGTAAAGAGG TCACTTGTTA TTTGCATCTT CCAAATGATG AAACGATTCA TCCTGTGGTG
ATTATTAGTG GTGGACTCGA TACCCTGCAG TGTGAATTAT TACCCCTGTT TGAAAAGGAG
CTTGCCCCGG CAGGCATTGC GATGCTAACC GTCGACTTAC CCGGCATTGG TTTTGCCTCG
CATGTCAAAC TGGATCAAAA CTCATCCAAT TTACATCAGG CCATTTGCCA TTTTTTAAAA
GGAGTACCTT GGGTTGATCA TGATCGTATT GCGTTGATGG GAATGCGCTT TGGCGGTAAT
GTGGCTGCTC GTTTAGCCTT TTTAGAGCCT AACTGTGTTA AATCTGTTGT CTGTGTAGGT
GCTGCTGTGG GCAGTATCTT TGATAATTTA GATAATTTTA AAAAATTACC GCCGATGCTA
TTAGATTGCA TTGCATCACG TATGCAGATT AATAATTCCA GCGTTGAGAT GTTGTATAAG
TTTTGTGTGC CCCTTTCACT TATTAAACAG GGATTGCTTG CTCGGACGCG CATCAAAACC
CCTTTATTAA GTATTGGGCA CAAAGATGAT TTAATTTGCA ACGAGCAAGA TTTAAAGTTG
ATTGCCCGTG CCAGTCGTGA AGGAGAATCA CATATTATTG ATAAACCTCC CATATTTGAA
TCATATTTAA AATCTTTAAG TTATTCTGCT GAATGGTTAA CAATACATCT TGCTGAGTAG
 
Protein sequence
MSENLSETLF VHKSNVQETS TIVANSATKK NHKQNNVVME GEEKPGWYRL LKFMLWSWQG 
LDLIECSEVL ARIAVSTHPR SDQELLDSVI GFHSGNWSYE WTQKAMFYYK QGKAYAQQGE
PEKAKKAYYL ASQFYSVASY PHLKGDELSL QAQALAFNNY KESAKYNHNM ILKEIKVPFQ
GKEVTCYLHL PNDETIHPVV IISGGLDTLQ CELLPLFEKE LAPAGIAMLT VDLPGIGFAS
HVKLDQNSSN LHQAICHFLK GVPWVDHDRI ALMGMRFGGN VAARLAFLEP NCVKSVVCVG
AAVGSIFDNL DNFKKLPPML LDCIASRMQI NNSSVEMLYK FCVPLSLIKQ GLLARTRIKT
PLLSIGHKDD LICNEQDLKL IARASREGES HIIDKPPIFE SYLKSLSYSA EWLTIHLAE