| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ping_2937 |
|---|
| Symbol | |
|---|
| ID | 4623645 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychromonas ingrahamii 37 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008709 |
|---|
| Strand | + |
|---|
| Start bp | 3621045 |
|---|
| End bp | 3622547 |
|---|
| Gene Length | 1503 bp |
|---|
| Protein Length | 500 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 639798055 |
|---|
| Product | 6-phosphogluconate dehydrogenase, decarboxylating |
|---|
| Protein accession | YP_944238 |
|---|
| Protein GI | 119946558 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0362] 6-phosphogluconate dehydrogenase |
|---|
| TIGRFAM ID | [TIGR00873] 6-phosphogluconate dehydrogenase, decarboxylating |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.350304 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGACTA AAATAGATAT TGCCGTGATA GGCTTAGGCG TGATGGGTGC CAATATGGCA
CTAAATTTAG CAGAGCGGAG ATTTTCAATA GCCGCTTTCG ACACTAATGA GGCTCGCCGT
CTCGACACCG CTAAACGCCA CCAAGCGTTA TCGGCTGCAG CACTCACCAC TGTTGCTTCT
CTTTCTGAGT TAATCGACCA ACTTGCTACA CCGCGCTGCA TCATACTCTC GGTTCCTGCG
GGCTCTATTG TGGATATTAT TTGTCGGGAC TTGCTGGCAG CAGGTTTACA GCAAGATGAT
ATTGTTGTCG ATACGGGCAA CAGCCAATGG CGCGACTCGA TTGATCGGGC GCAAACATAC
GCAGGTAAAT TTAACTTCTT TACCTGCGCC ATTTCCGGCG GAGAAATGGG TGCACGTTTT
GGACCTTCAT TAATGCCCAG TGGTGACAAA AAAGTATGGC AGCAGTTAAA ACCTATCTGG
CAGGCAATGG CAGCAAAAGT CAATCCCGTT ACCGGTACAG AAATTGTGCG CAGCCAAGTA
GAGCACCCCT TACCAGAAGG CGAACCTTGT GCTGAGTATA TTGGCCCGAT TGGCTCCGGT
CATTTTGTAA AAATGGTGCA TAACGGTATT GAATATGCAG ACATGCAGAT GATTGCCGAA
ATAGTACAAT TTATGCGTCA AATATTGACC ATGTCGGCAG TGGAAGTCGG TGCGGTATTT
CGCCGCTGGA ATAAAGGAAA ACTGCAAAGT TATCTGATTG AAATTACGGC TGACATTCTT
CTAACGGTCG ATCCTAAAAC AGGCCAGCCA CTGGTCGATG TGATTATGGA TCAGGCCAGT
CAAAAAGGCA CAGGAAACTG GACTGCACGT GAAGCATTAG TACTCGGCGT ACCGGCAACG
GCCATTACCG CCTCGGTATT TGCTCGCTGC CTGAGTACTC AAAAAACGAT TCGTCAAATC
GCTGCAGTGC AGTTAACCGG TCCTATTATC AGCACTGACG ATAAAACCTT ATGGATTGAT
AAACTGGCAG ATGCGCTGTA CTGCTCAAAA ATCTGTAGCT ATGCGCAGGG GTTCGAGCTG
ATGTCTGCTG CTGAAAAAGA GCATAATTGG ACGCTTGATT ATATTTCAAT CGCTAAAATA
TGGCGTGGCG GTTGTGTGAT ACGCGCTCAC TTTTTAGATG ATATTTCCAA GGCCTATCAA
ACTGAGCCTG AATTACTTAA TTTAATGCTG GCGGAAAGGT TCACAGACAG CCTGGCGAAA
GGTCAGTTAT CCTGGCGGGA AGTCTTAGCC AAAGCGATTA TGCAGGGGAT GCCAATGCCC
GCTATCAGCG CTGCGATCAG CTACTACGAT TGCTACCGTG AAGCTGATTC CTCTGCCAGC
CTGATTCAGG CAATGCGTGA TTATTTTGGC GGCCATACGT ACCTGCGTAA AGATCGGGAT
TCAAGACAAA GTTTCCATTA TGATTGGCAC TTTGGTAGTG GTGAACAAAC GGCTGAGCAT
TAA
|
|---|
| Protein sequence | MKTKIDIAVI GLGVMGANMA LNLAERRFSI AAFDTNEARR LDTAKRHQAL SAAALTTVAS
LSELIDQLAT PRCIILSVPA GSIVDIICRD LLAAGLQQDD IVVDTGNSQW RDSIDRAQTY
AGKFNFFTCA ISGGEMGARF GPSLMPSGDK KVWQQLKPIW QAMAAKVNPV TGTEIVRSQV
EHPLPEGEPC AEYIGPIGSG HFVKMVHNGI EYADMQMIAE IVQFMRQILT MSAVEVGAVF
RRWNKGKLQS YLIEITADIL LTVDPKTGQP LVDVIMDQAS QKGTGNWTAR EALVLGVPAT
AITASVFARC LSTQKTIRQI AAVQLTGPII STDDKTLWID KLADALYCSK ICSYAQGFEL
MSAAEKEHNW TLDYISIAKI WRGGCVIRAH FLDDISKAYQ TEPELLNLML AERFTDSLAK
GQLSWREVLA KAIMQGMPMP AISAAISYYD CYREADSSAS LIQAMRDYFG GHTYLRKDRD
SRQSFHYDWH FGSGEQTAEH
|
|---|
| |