| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ping_2935 |
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| Symbol | |
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| ID | 4623643 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychromonas ingrahamii 37 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008709 |
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| Strand | + |
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| Start bp | 3619155 |
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| End bp | 3620477 |
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| Gene Length | 1323 bp |
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| Protein Length | 440 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 639798053 |
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| Product | TRAP dicarboxylate transporter, DctM subunit |
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| Protein accession | YP_944236 |
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| Protein GI | 119946556 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG4664] TRAP-type mannitol/chloroaromatic compound transport system, large permease component |
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| TIGRFAM ID | [TIGR00786] TRAP transporter, DctM subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.546259 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTTTGATT TATCCGCTAT TGGCATAGGC TATGGCAGTT TATTAATGTT AGTGATGATG
ATAGCCCTGC TGTTAACCGG CATGCAGCTT GCGTTTGTGA CCGGTTTTGT GGCGCTATTT
TTCACTATTG GCTGGTTTGG AATTGATGCG CTGCCTTTGG TGACGAGTCG TTTATATAGC
TTTGTTGATA GTTATATTTT TCTTGCTGTC CCTATGTTTG TATTGATGGC CGCACTGCTG
GACCGATCCG GTATTGCCCA TGACCTTTTT GAGGCGATGA AATTATTTGG CAAACGTCTG
CGCGGTGGTG TGGCGGTTCA GACTTTACTG GTCGCGGTTA TATTGGCTTC TATGTCCGGT
GTTATCGGTG GTGAAACCGT GTTACTGGGT ATTCTTGCGC TGCCGCAGAT GCTGCGTTTA
GGTTATGATC GTAAGTTGGC TATTGGGGTC ACCTGTGCCG GCGGCGCATT AGGGACGATG
CTGCCGCCCA GTATAGTACT AATTATTTAT GGTTTAACGG CCAGTGTCTC TATCGGCGAT
CTGTTTAAAG CGTCGTTCTT ACCAGCTTTG ATACTCGCCG TCTTCTATAT ATTGTATGTG
TTAATACGCT GTAAAATAAA TCCATCCCTA GCACCTATAC CCAGTGCAGA AGAATTGGCT
AAAGATGCCG AAACACAACC GAATTTTTTC AAGGCGCTGT TATTCCCGTT ATTATCGGTT
CTCGTTGTAT TAGGCAGTAT CTATACCGGC GTTGCATCGG TCACCGAAGC ATCGGCCCTC
GGTGTTGTCG GTATTATAAT CAGTACCTGG ATTCGTAAAG AGCTTTGTTT TGCAATGCTG
AAAGATGCAG CGATTGCGAC CATGAAAACC TGCGGTATGA TCATCTGGAT AGGGATAGGT
GCAACCGCCT TAGTAGGTGT GTACAACCTG ATGGGCGGCA TTGATTTTGT GGAAGTGACT
ATATTGTCCC TCAGTGGCGG AAATGCAACG GCTACCCTGC TGATTATGAT GGGTATCTTA
TTAGTGTTAG GCATGTTCCT TGATTGGGTG GGTGTCGCGT TATTAACCAT GCCTATTTTT
GTGCCCATTA TTGTCGGTTT AGGGATGGAT CCCGTTTGGT TTGGTGTGGT TTTCTGCCTT
AATATGCAGG TATCATTCCT TTCACCTCCC TTTGGCCCCG CCGCCTTCTA TTTGAAATCC
GTGGCACCAA AAGATATCAG TCTGGGGGAA ATATTCAGTG CACTGGTGCC TTTTATCTGC
CTGCAAATTG TCACCCTTAG TTTGGTTATC ATTTTCCCCG TTCTCGCTTT ATGGTGGAGA
TAA
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| Protein sequence | MFDLSAIGIG YGSLLMLVMM IALLLTGMQL AFVTGFVALF FTIGWFGIDA LPLVTSRLYS
FVDSYIFLAV PMFVLMAALL DRSGIAHDLF EAMKLFGKRL RGGVAVQTLL VAVILASMSG
VIGGETVLLG ILALPQMLRL GYDRKLAIGV TCAGGALGTM LPPSIVLIIY GLTASVSIGD
LFKASFLPAL ILAVFYILYV LIRCKINPSL APIPSAEELA KDAETQPNFF KALLFPLLSV
LVVLGSIYTG VASVTEASAL GVVGIIISTW IRKELCFAML KDAAIATMKT CGMIIWIGIG
ATALVGVYNL MGGIDFVEVT ILSLSGGNAT ATLLIMMGIL LVLGMFLDWV GVALLTMPIF
VPIIVGLGMD PVWFGVVFCL NMQVSFLSPP FGPAAFYLKS VAPKDISLGE IFSALVPFIC
LQIVTLSLVI IFPVLALWWR
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